RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
SOD1-202ENST00000389995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 SLC12A8A0AV02 714 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 EIF3DO15371 548 aaKnown RBP eCLIP12.34□□□□□ -0.43
SOD1-202ENST00000389995 EXOC3O60645 756 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 RALAP11233 206 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 HOXD9P28356 352 aaPredicted RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 ASPAP45381 313 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 SGSHP51688 502 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 RACK1P63244 317 aaKnown RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 COG7P83436 770 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 KCNH2Q12809 1159 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 FAM26FQ5R3K3 315 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 ARHGAP40Q5TG30 622 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 NCEH1Q6PIU2 408 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 ADIPOR2Q86V24 386 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 FAM181AQ8N9Y4 354 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 TSC1Q92574 1164 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 NDRG1Q92597 394 aaKnown RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 HNRNPABQ99729 332 aaKnown RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 AASDHPPTQ9NRN7 309 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 ABCB8Q9NUT2 735 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 PLA2G4CQ9UP65 541 aa12.34□□□□□ -0.43
SOD1-202ENST00000389995 UBR5O95071 2799 aaPredicted RBP12.34□□□□□ -0.43
SOD1-202ENST00000389995 A0A1W2PPC4 97 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 TIMM44O43615 452 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 GLDCP23378 1020 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 GALCP54803 685 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 EHHADHQ08426 723 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 KCNJ12Q14500 433 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 TBC1D25Q3MII6 688 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 KDM7AQ6ZMT4 941 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 CCDC186Q7Z3E2 898 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 CPXM2Q8N436 756 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 WFDC5Q8TCV5 224 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 LGMNQ99538 433 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 SLC2A11Q9BYW1 496 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 DCLK3Q9C098 648 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 SGK2Q9HBY8 427 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 MARCH2Q9P0N8 246 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
SOD1-202ENST00000389995 A0A1W2PP55 124 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 ERVH48-1M5A8F1 160 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 ARHGAP6O43182 974 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 DFNA5O60443 496 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 C1SP09871 688 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 CD58P19256 250 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 EPHA8P29322 1005 aaPredicted RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 CD70P32970 193 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 ACTN2P35609 894 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 INSM1Q01101 510 aaPredicted RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 TTC31Q49AM3 519 aaPredicted RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 PPP1R26Q5T8A7 1209 aaPredicted RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 MBLAC2Q68D91 279 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 ZNF776Q68DI1 518 aaPredicted RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 RSRC2Q7L4I2 434 aaKnown RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 TADA2BQ86TJ2 420 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 DHX58Q96C10 678 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 USP28Q96RU2 1077 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.32□□□□□ -0.44
SOD1-202ENST00000389995 NEUROG2Q9H2A3 272 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 TNMDQ9H2S6 317 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
SOD1-202ENST00000389995 CLMPQ9H6B4 373 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 CAAP1Q9H8G2 361 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 SLC39A2Q9NP94 309 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 KBTBD4Q9NVX7 518 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 FBXL12Q9NXK8 326 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 CLIC5Q9NZA1 410 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 GGA2Q9UJY4 613 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 CLCA2Q9UQC9 943 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 USP3Q9Y6I4 520 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 RP1P56715 2156 aa12.32□□□□□ -0.44
SOD1-202ENST00000389995 UTP20O75691 2785 aaKnown RBP12.31□□□□□ -0.44
SOD1-202ENST00000389995 A0A1W2PR77 199 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 MID1O15344 667 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 SDC3O75056 442 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 PABPC1P11940 636 aaKnown RBP12.31□□□□□ -0.44
SOD1-202ENST00000389995 P4HA1P13674 534 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 CD38P28907 300 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 PSEN1P49768 467 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 CLDN10P78369 228 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 E2F4Q16254 413 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 MPPE1Q53F39 396 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 ZNF394Q53GI3 561 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 DHX40Q8IX18 779 aaKnown RBP12.31□□□□□ -0.44
SOD1-202ENST00000389995 ZNF276Q8N554 614 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 DUSP16Q9BY84 665 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
SOD1-202ENST00000389995 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
SOD1-202ENST00000389995 GDF3Q9NR23 364 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 STRIP2Q9ULQ0 834 aa12.31□□□□□ -0.44
SOD1-202ENST00000389995 NCKAP1Q9Y2A7 1128 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms