RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DNAL1Q4LDG9 190 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 TFDP3Q5H9I0 405 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 PPP1R26Q5T8A7 1209 aaPredicted RBP19.39■□□□□ 0.69
CSPG5-202ENST00000383738 ANO7Q6IWH7 933 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 IFNEQ86WN2 208 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 MECRQ9BV79 373 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 SMIM28A0A1B0GU29 152 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 JCHAINP01591 159 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 SPATA31D3P0C874 917 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 TPBGLP0DKB5 382 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 BST2Q10589 180 aaKnown RBP19.39■□□□□ 0.69
CSPG5-202ENST00000383738 MMRN1Q13201 1228 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 POLNQ7Z5Q5 900 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 TTC7BQ86TV6 843 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 DEFB107AQ8IZN7 70 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 ATPAF2Q8N5M1 289 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 MAGEC3Q8TD91 643 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 USP13Q92995 863 aaPredicted RBP19.39■□□□□ 0.69
CSPG5-202ENST00000383738 CYP3A43Q9HB55 503 aa19.39■□□□□ 0.69
CSPG5-202ENST00000383738 USP12O75317 370 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 LCA5LO95447 670 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 SPOCD1Q6ZMY3 1216 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 MUC3BQ9H195 1237 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 EBF2Q9HAK2 575 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 C20orf96Q9NUD7 363 aaPredicted RBP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 V9GYQ6 96 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 PROCP04070 461 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 RECQLP46063 649 aaPredicted RBP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 NUDT2P50583 147 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 RPL10AP62906 217 aaKnown RBP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 TWF1Q12792 350 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 LPCAT4Q643R3 524 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 MFSD14AQ96MC6 490 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 MRPL1Q9BYD6 325 aaKnown RBP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 GABRQQ9UN88 632 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 CES2O00748 559 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 EEF1DP29692 281 aaKnown RBP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 ICAM3P32942 547 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 NSUN2Q08J23 767 aaKnown RBP eCLIP19.38■□□□□ 0.69
CSPG5-202ENST00000383738 SLFN11Q7Z7L1 901 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 JOSD2Q8TAC2 188 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 CCDC138Q96M89 665 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 GTSE1Q9NYZ3 720 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 SLC17A7Q9P2U7 560 aa19.38■□□□□ 0.69
CSPG5-202ENST00000383738 YWHAZP63104 245 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 OCRLQ01968 901 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 FAM81AQ8TBF8 368 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 APOBEC3GQ9HC16 384 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 MYH3P11055 1940 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 TSPAN3O60637 253 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 FKTNO75072 461 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 ATICP31939 592 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PRKCIP41743 596 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 NPNTQ6UXI9 565 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 EIF1ADQ8N9N8 165 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 DTNBP1Q96EV8 351 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 SCLYQ96I15 445 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PHF12Q96QT6 1004 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 NIFKQ9BYG3 293 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 UNKQ9C0B0 810 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 LAMB4A4D0S4 1761 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 C5orf60A6NFR6 353 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 DDX3YO15523 660 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 KPNA6O60684 536 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 HNRNPCL1O60812 293 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 OASLQ15646 514 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 OXNAD1Q96HP4 312 aaPredicted RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PDZD7Q9H5P4 517 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 CDHR5Q9HBB8 845 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 IPO11Q9UI26 975 aaKnown RBP19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PCDHA3Q9Y5H8 950 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PCDHA2Q9Y5H9 948 aa19.37■□□□□ 0.69
CSPG5-202ENST00000383738 PTPN1P18031 435 aaKnown RBP19.36■□□□□ 0.69
CSPG5-202ENST00000383738 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
CSPG5-202ENST00000383738 C16orf72Q14CZ0 275 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 ZDHHC24Q6UX98 284 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 GDPD5Q8WTR4 605 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 CCDC90BQ9GZT6 254 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 GMNNO75496 209 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 COPAP53621 1224 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 FAAP100Q0VG06 881 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 MAMLD1Q13495 774 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 SLC10A6Q3KNW5 377 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 COBLL1Q53SF7 1204 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 C16orf46Q6P387 395 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 GSTCDQ8NEC7 633 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 DNAJC16Q9Y2G8 782 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 TOGARAM1Q9Y4F4 1720 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 CA12O43570 354 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 KCNA4P22459 653 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 RNF43Q68DV7 783 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 RIPOR1Q6ZS17 1223 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 STKLD1Q8NE28 680 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 PLEKHO2Q8TD55 490 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 ART4Q93070 314 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 IL1RL2Q9HB29 575 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 GRHL1Q9NZI5 618 aa19.36■□□□□ 0.69
CSPG5-202ENST00000383738 TSPAN1O60635 241 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms