RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ARHGAP39Q9C0H5 1083 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SPC25Q9HBM1 224 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 ALG13Q9NP73 1137 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 IRAK4Q9NWZ3 460 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 SIRPGQ9P1W8 387 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PPARGC1AQ9UBK2 798 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TUBGCP4Q9UGJ1 667 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 XPO7Q9UIA9 1087 aaKnown RBP9.23□□□□□ -0.93
GPNMB-202ENST00000381990 GABRQQ9UN88 632 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 PHF24Q9UPV7 400 aa9.23□□□□□ -0.93
GPNMB-202ENST00000381990 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM88BA6NKF7 163 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 BUD23O43709 281 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 FLT3LGP49771 235 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 NKX3-2P78367 333 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 OTUD4Q01804 1114 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 ZNF252P-AS1Q0IIN9 211 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 BBS9Q3SYG4 887 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 PABPC1LQ4VXU2 614 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CFAP157Q5JU67 520 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 UBXN11Q5T124 520 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 DHDDSQ86SQ9 333 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 RASSF3Q86WH2 238 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TREML1Q86YW5 311 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CRLF3Q8IUI8 442 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 ACTL9Q8TC94 416 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 LZICQ8WZA0 190 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TTC1Q99614 292 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CCDC106Q9BWC9 280 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 APOL6Q9BWW8 343 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 S100A14Q9HCY8 104 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CYTH4Q9UIA0 394 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 PLLPQ9Y342 182 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 F8VP50 259 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 M0QYV0 167 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 BIRC5O15392 142 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 SEPT4O43236 478 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 XPOTO43592 962 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 AP1G1O43747 822 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CD4P01730 458 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 SNRPAP09012 282 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 UQCRBP14927 111 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 KCNE1P15382 129 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TCF4P15884 667 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 AKAP5P24588 427 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 RPL22P35268 128 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 MRPS6P82932 125 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TMPRSS15P98073 1019 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 WASHC5Q12768 1159 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 STILQ15468 1287 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TAZQ16635 292 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 KBTBD12Q3ZCT8 623 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 XKR4Q5GH76 650 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 EFHC1Q5JVL4 640 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 GLRA4Q5JXX5 417 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 ARCQ7LC44 396 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 PRPF39Q86UA1 669 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 E2F7Q96AV8 911 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 C18orf25Q96B23 403 aaPredicted RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 HAUS1Q96CS2 278 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 CPXM1Q96SM3 734 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 DDX50Q9BQ39 737 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 C12orf65Q9H3J6 166 aaKnown RBP9.22□□□□□ -0.93
GPNMB-202ENST00000381990 GTF2IRD1Q9UHL9 959 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 SNX9Q9Y5X1 595 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 TEX264Q9Y6I9 313 aa9.22□□□□□ -0.93
GPNMB-202ENST00000381990 SMIM28A0A1B0GU29 152 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 C3orf70A6NLC5 250 aaPredicted RBP9.21□□□□□ -0.93
GPNMB-202ENST00000381990 M0QZ92 97 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 PPEF2O14830 753 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 ATP9BO43861 1147 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 RNASEH1O60930 286 aaKnown RBP9.21□□□□□ -0.93
GPNMB-202ENST00000381990 TMEM63AO94886 807 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 BAG2O95816 211 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 KRT3P12035 628 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 GPD2P43304 727 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 GABRB2P47870 512 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 CPA2P48052 419 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 PSMC1P62191 440 aaKnown RBP9.21□□□□□ -0.93
GPNMB-202ENST00000381990 OGDHQ02218 1023 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 KDSRQ06136 332 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 FAAP100Q0VG06 881 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 BST1Q10588 318 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 C9orf57Q5W0N0 161 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 LCLAT1Q6UWP7 414 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 CXCL17Q6UXB2 119 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 ARID3BQ8IVW6 561 aaPredicted RBP9.21□□□□□ -0.93
GPNMB-202ENST00000381990 FNIP1Q8TF40 1166 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 NAT14Q8WUY8 206 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 BTBD9Q96Q07 612 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 UBE2OQ9C0C9 1292 aaKnown RBP9.21□□□□□ -0.93
GPNMB-202ENST00000381990 KLHL4Q9C0H6 718 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 PPM1HQ9ULR3 514 aa9.21□□□□□ -0.93
GPNMB-202ENST00000381990 A0A1B0GVG6 124 aa9.21□□□□□ -0.94
GPNMB-202ENST00000381990 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.94
GPNMB-202ENST00000381990 PEX1O43933 1283 aa9.21□□□□□ -0.94
GPNMB-202ENST00000381990 CCNT2O60583 730 aaKnown RBP9.21□□□□□ -0.94
GPNMB-202ENST00000381990 SNNO75324 88 aaPredicted RBP9.21□□□□□ -0.94
GPNMB-202ENST00000381990 PGK1P00558 417 aa9.21□□□□□ -0.94
GPNMB-202ENST00000381990 RFC1P35251 1148 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms