RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 TP53INP2Q8IXH6 220 aa20.49■□□□□ 0.87
PDLIM5-205ENST00000380180 EXOC1LA0A1B0GW35 172 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 IRAK2O43187 625 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CDH16O75309 829 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 APRTP07741 180 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 SSTR1P30872 391 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 LSP1P33241 339 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 MAGEA11P43364 429 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 PDK1Q15118 436 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 PPP1R21Q6ZMI0 780 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CCNYQ8ND76 341 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 DIS3LQ8TF46 1054 aaKnown RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CASP10Q92851 521 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 PRDM12Q9H4Q4 367 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 OSER1Q9NX31 292 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 TBK1Q9UHD2 729 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 NUDT5Q9UKK9 219 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 SCML2Q9UQR0 700 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 AVILO75366 819 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CPB1P15086 417 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 MAGEA6P43360 314 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 USP46P62068 366 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ELAVL2Q12926 359 aaKnown RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 PRKD1Q15139 912 aaPredicted RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ANKRD20A2Q5SQ80 823 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ANKRD20A1Q5TYW2 823 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ANKRD20A3Q5VUR7 823 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 MON1AQ86VX9 555 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CYP4X1Q8N118 509 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 VPS52Q8N1B4 723 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 MDM1Q8TC05 714 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 BCL7CQ8WUZ0 217 aaPredicted RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ARHGEF2Q92974 986 aaKnown RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 EPAS1Q99814 870 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 SMOC2Q9H3U7 446 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 FBXO44Q9H4M3 255 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 CNOT10Q9H9A5 744 aaKnown RBP20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 ARHGEF38Q9NXL2 777 aa20.48■□□□□ 0.87
PDLIM5-205ENST00000380180 FOXO6A8MYZ6 492 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 TBC1D4O60343 1298 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 LRIG2O94898 1065 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 GCAP28676 217 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 ELK3P41970 407 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 GLUD2P49448 558 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 ARHGEF18Q6ZSZ5 1173 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 C3orf62Q6ZUJ4 267 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 PDZD4Q76G19 769 aaPredicted RBP20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 IGDCC3Q8IVU1 814 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 PALM2Q8IXS6 379 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 LRRC43Q8N309 656 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 ATP11CQ8NB49 1132 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 GPR152Q8TDT2 470 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 P2RY11Q96G91 374 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 SELENOSQ9BQE4 189 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 EURLQ9NYK6 297 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 LGALS13Q9UHV8 139 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 SLC27A5Q9Y2P5 690 aa20.47■□□□□ 0.87
PDLIM5-205ENST00000380180 A0A0A0MRY4 1105 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 PPP1R12AO14974 1030 aaPredicted RBP20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 MSI1O43347 362 aaKnown RBP20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 SOAT2O75908 522 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 ATP5DP30049 168 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 ZNF135P52742 658 aaPredicted RBP20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 GPR17Q13304 367 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 C1orf53Q5VUE5 145 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 TAOK1Q7L7X3 1001 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 SPATA13Q96N96 652 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 SIK2Q9H0K1 926 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 OSBPL2Q9H1P3 480 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 CHMP2BQ9UQN3 213 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 ATP11BQ9Y2G3 1177 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 TEX264Q9Y6I9 313 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 MTMR11A4FU01 709 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 POC1B-GALNT4F8VUJ3 575 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 EPHB2P29323 1055 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 IKBKEQ14164 716 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 BRMS1LQ5PSV4 323 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 RNF19BQ6ZMZ0 732 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 CAND1Q86VP6 1230 aaKnown RBP20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 NPWQ8N729 165 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 TTPALQ9BTX7 342 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 FRMD8Q9BZ67 464 aaPredicted RBP20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 CRISPLD1Q9H336 500 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 RABEP2Q9H5N1 569 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 RABGEF1Q9UJ41 708 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 TBX21Q9UL17 535 aa20.46■□□□□ 0.87
PDLIM5-205ENST00000380180 H7C4K7 107 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 PHBP35232 272 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 ALDH7A1P49419 539 aaKnown RBP20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 CBLBQ13191 982 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 ZSCAN26Q16670 478 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 AGGF1Q8N302 714 aaeCLIP20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 VWCEQ96DN2 955 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 FERMT1Q9BQL6 677 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 IL37Q9NZH6 218 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 RAD54BQ9Y620 910 aa20.45■□□□□ 0.86
PDLIM5-205ENST00000380180 RNF103O00237 685 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 PAGE1O75459 146 aa20.44■□□□□ 0.86
PDLIM5-205ENST00000380180 VNN2O95498 520 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms