RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 NUGGCQ68CJ6 796 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 FAM171BQ6P995 826 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 RNF180Q86T96 592 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 C3orf58Q8NDZ4 430 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SLC44A1Q8WWI5 657 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 SPATA13Q96N96 652 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ELAC2Q9BQ52 826 aaKnown RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 BRD8Q9H0E9 1235 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 ZNF180Q9UJW8 692 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 NOD1Q9Y239 953 aa10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 USP15Q9Y4E8 981 aaPredicted RBP10.82□□□□□ -0.68
POLR2J3-201ENST00000379340 FRMPD3Q5JV73 1810 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 TCRBV9S1A1TA0A576 114 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 MYBPHLA2RUH7 354 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CASTOR2A6NHX0 329 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CCT8L1PA6NM43 557 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 HHLA1C9JL84 531 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 TYROBPO43914 113 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 GSTA1P08263 222 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 INHBAP08476 426 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CA4P22748 312 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CYP2C18P33260 490 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 ADRA1BP35368 520 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 NDUFV1P49821 464 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 ITGA7Q13683 1181 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 DPYSQ14117 519 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 TRIM71Q2Q1W2 868 aaKnown RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 LGSNQ5TDP6 509 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 DCLRE1AQ6PJP8 1040 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 FAM43BQ6ZT52 329 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CYS1Q717R9 158 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CAND1Q86VP6 1230 aaKnown RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CCNJLQ8IV13 435 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 TAB3Q8N5C8 712 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 ZMIZ2Q8NF64 920 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 GDAP1Q8TB36 358 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 SLC7A14Q8TBB6 771 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CCDC110Q8TBZ0 833 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 MZB1Q8WU39 189 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 CCT6BQ92526 530 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 MYLPFQ96A32 169 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 ADAM2Q99965 735 aa10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 DMAP1Q9NPF5 467 aaPredicted RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 ZC3H7BQ9UGR2 993 aaKnown RBP10.81□□□□□ -0.68
POLR2J3-201ENST00000379340 MOXD2PA6NHM9 499 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 NRP1O14786 923 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 TRIM66O15016 1216 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 DCLK1O15075 740 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 MTSS1O43312 755 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 MFSD11O43934 449 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 MGEA5O60502 916 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 EOMESO95936 686 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 APRTP07741 180 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PRKCHP24723 683 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ATN1P54259 1190 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 NRLP54845 237 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 WDR4P57081 412 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 TSPY1Q01534 308 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ACTN3Q08043 901 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SEMA3BQ13214 749 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SHHQ15465 462 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SEPT7Q16181 437 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PDK4Q16654 411 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ANKRD20A2Q5SQ80 823 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ANKRD20A1Q5TYW2 823 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 HHATQ5VTY9 493 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ANKRD20A3Q5VUR7 823 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SYPL2Q5VXT5 272 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PM20D1Q6GTS8 502 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 RFX8Q6ZV50 586 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SLC26A11Q86WA9 606 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ECHDC2Q86YB7 292 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PYROXD2Q8N2H3 581 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 MICALL1Q8N3F8 863 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 GBP7Q8N8V2 638 aaPredicted RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 SUSD3Q96L08 255 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 WDR6Q9NNW5 1121 aaKnown RBP10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PIGVQ9NUD9 493 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 FGFR1OP2Q9NVK5 253 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 ARL2BPQ9Y2Y0 163 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 TTLL3Q9Y4R7 772 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 PTPRDP23468 1912 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 LTBP2Q14767 1821 aa10.8□□□□□ -0.68
POLR2J3-201ENST00000379340 YJEFN3A6XGL0 299 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 FOXO6A8MYZ6 492 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 E7ENQ6 273 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 SPAG7O75391 227 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 KRT37O76014 449 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 B3GAT3O94766 335 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 METTL18O95568 372 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 APOEP02649 317 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 MT-ND3P03897 115 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 FYNP06241 537 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 ALADP13716 330 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 VAV1P15498 845 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 KRT4P19013 534 aa10.79□□□□□ -0.68
POLR2J3-201ENST00000379340 TAC1P20366 129 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms