RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 ABCB8Q9NUT2 735 aa25.63■■□□□ 1.69
TNFRSF4-201ENST00000379236 CYTH4Q9UIA0 394 aa25.63■■□□□ 1.69
TNFRSF4-201ENST00000379236 PLA2G4CQ9UP65 541 aa25.63■■□□□ 1.69
TNFRSF4-201ENST00000379236 GOLGA6L7A0A1B0GV03 622 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 NDUFS2O75306 463 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 FYNP06241 537 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 EPHX1P07099 455 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 TPM2P07951 284 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 EEF1GP26641 437 aaKnown RBP25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 BPIFB4P59827 614 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 YWHAZP63104 245 aaKnown RBP25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 FNDC3BQ53EP0 1204 aaKnown RBP25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 PIK3R6Q5UE93 754 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 CHST9Q7L1S5 443 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 TAC4Q86UU9 113 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 PPP1R13BQ96KQ4 1090 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 FCRL2Q96LA5 508 aaPredicted RBP25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 MRGPRX1Q96LB2 322 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 PRDM16Q9HAZ2 1276 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 SIX2Q9NPC8 291 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 RXFP3Q9NSD7 469 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 STIM2Q9P246 746 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 GGA2Q9UJY4 613 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 PCDHGC3Q9UN70 934 aa25.62■■□□□ 1.69
TNFRSF4-201ENST00000379236 PI4KAP42356 2102 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 PABPC1P11940 636 aaKnown RBP25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 HLA-FP30511 346 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 FUT11Q495W5 492 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 MIIPQ5JXC2 388 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 MPP7Q5T2T1 576 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 MFN1Q8IWA4 741 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 SORCS1Q8WY21 1168 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 SLC6A17Q9H1V8 727 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 FAM204AQ9H8W3 233 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 SAMSN1Q9NSI8 373 aaKnown RBP25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 AJAP1Q9UKB5 411 aaPredicted RBP25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 NFE2L3Q9Y4A8 694 aa25.61■■□□□ 1.69
TNFRSF4-201ENST00000379236 IGHV1OR15-9A0A0B4J2B8 117 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 FOXN3O00409 490 aaPredicted RBP25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 ACADMP11310 421 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 SLC6A4P31645 630 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 PTGER3P43115 390 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 SGSHP51688 502 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 FAM133BQ5BKY9 247 aaKnown RBP25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 TCP11X2Q5H9J9 407 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 PPM1JQ5JR12 505 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 EFHC1Q5JVL4 640 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 SYPL2Q5VXT5 272 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 SYT12Q8IV01 421 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 DEFB119Q8N690 84 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 C1orf131Q8NDD1 294 aaKnown RBP25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 NUSAP1Q9BXS6 441 aaKnown RBP25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 CD248Q9HCU0 757 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 TJP2Q9UDY2 1190 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 SLC12A6Q9UHW9 1150 aa25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 ATXN2Q99700 1313 aaKnown RBP25.6■■□□□ 1.69
TNFRSF4-201ENST00000379236 TRUB2O95900 331 aaKnown RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 ATP5BP06576 529 aaKnown RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 POLR2EP19388 210 aaKnown RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 CDK17Q00537 523 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 DCAF6Q58WW2 860 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 OR6B2Q6IFH4 312 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 SLC47A2Q86VL8 602 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 ATP6V0D2Q8N8Y2 350 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 PRCCQ92733 491 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 RNF34Q969K3 372 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 CPXM1Q96SM3 734 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 LSM14BQ9BX40 385 aaKnown RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 LHX5Q9H2C1 402 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 MUC22E2RYF6 1773 aaPredicted RBP25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 ADAMTS9Q9P2N4 1935 aa25.59■■□□□ 1.69
TNFRSF4-201ENST00000379236 LNP1A1A4G5 178 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 PATE3B3GLJ2 98 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 HSF2BPO75031 334 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 GLI1P08151 1106 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 PNMA6AP0CW24 399 aaPredicted RBP25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 PRKCHP24723 683 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 ZNF33AQ06730 810 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 CDH18Q13634 790 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 ENPP2Q13822 863 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 TRIM61Q5EBN2 209 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 TMEM215Q68D42 235 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 MBLAC2Q68D91 279 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 NADSYN1Q6IA69 706 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 SASS6Q6UVJ0 657 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 CHSY1Q86X52 802 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 CARNMT1Q8N4J0 409 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 CYB5D2Q8WUJ1 264 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 SIPA1Q96FS4 1042 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 SLC39A13Q96H72 371 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 TAB2Q9NYJ8 693 aa25.58■■□□□ 1.69
TNFRSF4-201ENST00000379236 SYNJ2BP-COX16A0A087WUM0 186 aa25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 ITPKAP23677 461 aa25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 CLCN1P35523 988 aa25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 LMAN2Q12907 356 aa25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 DRAP1Q14919 205 aaPredicted RBP25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 ZC3H12AQ5D1E8 599 aaKnown RBP25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 DAB2IPQ5VWQ8 1189 aa25.57■■□□□ 1.68
TNFRSF4-201ENST00000379236 C11orf57Q6ZUT1 292 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms