RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 MLXIPLQ9NP71 852 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 NINJ2Q9NZG7 142 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 TMEM120BA0PK00 339 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 CFAP69A5D8W1 941 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 TCP11X1B4DZS4 312 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 FGFR3P22607 806 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 ARL13BQ3SXY8 428 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 FAM182AQ5T1J6 154 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 FUT10Q6P4F1 479 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■■■■□ 21.1
SSU72-204ENST00000378726 CCDC33Q8N5R6 958 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 NAT8LQ8N9F0 302 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 DIS3LQ8TF46 1054 aaKnown RBP20.06■□□□□ 0.8
SSU72-204ENST00000378726 DYDC1Q8WWB3 177 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 SAYSD1Q9NPB0 183 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 ARHGEF4Q9NR80 690 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 FGFR1OP2Q9NVK5 253 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 BAIAP2L1Q9UHR4 511 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 ATP11BQ9Y2G3 1177 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 MFHAS1Q9Y4C4 1052 aa20.06■□□□□ 0.8
SSU72-204ENST00000378726 GOLGA8MH3BSY2 632 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 UBOX5O94941 541 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 YWHAGP61981 247 aaKnown RBP eCLIP20.05■□□□□ 0.8
SSU72-204ENST00000378726 DDR2Q16832 855 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 ANKRD22Q5VYY1 191 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 TMEM175Q9BSA9 504 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 PRDM16Q9HAZ2 1276 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 DTLQ9NZJ0 730 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 PCDHB5Q9Y5E4 795 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 SCN5AQ14524 2016 aa20.05■□□□□ 0.8
SSU72-204ENST00000378726 SF3B1O75533 1304 aaKnown RBP eCLIP20.05■□□□□ 0.81e-10■■■■■ 241.2
SSU72-204ENST00000378726 FAM72CH0Y354 149 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 I6L893 689 aaPredicted RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 EEF2KO00418 725 aaKnown RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 CXCR3P49682 368 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 ARPP19P56211 112 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 BASP1P80723 227 aaKnown RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 SCAPQ12770 1279 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 FAM72AQ5TYM5 149 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 C1orf53Q5VUE5 145 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 BTBD8Q5XKL5 378 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 FAM72DQ6L9T8 149 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 ZNF280DQ6N043 979 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 BEND5Q7L4P6 421 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 FAM72BQ86X60 149 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 SERPINB12Q96P63 405 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 TRIM62Q9BVG3 475 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 ABCC13Q9NSE7 274 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 OR6C75A6NL08 312 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 AMHP03971 560 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 SLC8A1P32418 973 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 IKBKEQ14164 716 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 SDHAF4Q5VUM1 108 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 KCNT2Q6UVM3 1135 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 BZW1Q7L1Q6 419 aaKnown RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 TAC4Q86UU9 113 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 CDKL3Q8IVW4 592 aaPredicted RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 ANKRD42Q8N9B4 389 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 ATAD1Q8NBU5 361 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 DQX1Q8TE96 717 aaKnown RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 TBC1D31Q96DN5 1066 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 RTP4Q96DX8 246 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 TKTL2Q9H0I9 626 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 TMEM39AQ9NV64 488 aa20.04■□□□□ 0.8
SSU72-204ENST00000378726 USP15Q9Y4E8 981 aaPredicted RBP20.04■□□□□ 0.8
SSU72-204ENST00000378726 TCRBV7S3A2A0A539 114 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 GPR15P49685 360 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 PGFP49763 221 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 ELAVL2Q12926 359 aaKnown RBP20.03■□□□□ 0.8
SSU72-204ENST00000378726 SLC45A4Q5BKX6 768 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 CENPUQ71F23 418 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 TMEM173Q86WV6 379 aaPredicted RBP20.03■□□□□ 0.8
SSU72-204ENST00000378726 NUP93Q8N1F7 819 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 RNF34Q969K3 372 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 ZNF333Q96JL9 665 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 C8orf48Q96LL4 319 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 KCNK9Q9NPC2 374 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 PAK5Q9P286 719 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 NLRC5Q86WI3 1866 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 ALOX15BO15296 676 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 EZRP15311 586 aaKnown RBP20.03■□□□□ 0.8
SSU72-204ENST00000378726 ELF1P32519 619 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 GAD2Q05329 585 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 MPP2Q14168 576 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 HP1BP3Q5SSJ5 553 aaPredicted RBP20.03■□□□□ 0.8
SSU72-204ENST00000378726 RFX8Q6ZV50 586 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 TAS1R1Q7RTX1 841 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 SCD5Q86SK9 330 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 TBX21Q9UL17 535 aa20.03■□□□□ 0.8
SSU72-204ENST00000378726 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.02■□□□□ 0.8
SSU72-204ENST00000378726 NCALDP61601 193 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 KCNJ2P63252 427 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 PDIA2Q13087 525 aaKnown RBP20.02■□□□□ 0.8
SSU72-204ENST00000378726 RTP2Q5QGT7 225 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 CYP4X1Q8N118 509 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 LRRC43Q8N309 656 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 STKLD1Q8NE28 680 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 GDAP1Q8TB36 358 aa20.02■□□□□ 0.8
SSU72-204ENST00000378726 N4BP2L2Q92802 583 aaPredicted RBP20.02■□□□□ 0.8
SSU72-204ENST00000378726 XPO7Q9UIA9 1087 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms