RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 E2F7Q96AV8 911 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ULK4Q96C45 1275 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 PPP1R36Q96LQ0 422 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 TWNKQ96RR1 684 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ZNF670Q9BS34 389 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 C16orf70Q9BSU1 422 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 NOD2Q9HC29 1040 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 PCDH18Q9HCL0 1135 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 NSMCE4AQ9NXX6 385 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 AFF4Q9UHB7 1163 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 STYXL1Q9Y6J8 313 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 LRP5O75197 1615 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 MYBPHLA2RUH7 354 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 TSPAN3O60637 253 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ATP5HO75947 161 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SCNN1BP51168 640 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 TSPAN17Q96FV3 270 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 LGMNQ99538 433 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 MANSC1Q9H8J5 431 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 OLA1Q9NTK5 396 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 IRAK4Q9NWZ3 460 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 CACNG4Q9UBN1 327 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SCAMP3O14828 347 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SELPP16109 830 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 MGAT1P26572 445 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 AVPR1AP37288 418 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 OVGP1Q12889 678 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 REM2Q8IYK8 340 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 DBF4BQ8NFT6 615 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 MIPOL1Q8TD10 442 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 VCX3BQ9H321 246 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 IARS2Q9NSE4 1012 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 PTPRJQ12913 1337 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 AMHP03971 560 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SHBGP04278 402 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 ITGAVP06756 1048 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 TNFRSF8P28908 595 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SH2D4BQ5SQS7 431 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 STRA8Q7Z7C7 330 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 CDC26Q8NHZ8 85 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 SRRDQ9UH36 339 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 GTF2IRD1Q9UHL9 959 aa14.57□□□□□ -0.08
SHROOM1-203ENST00000378679 HACD1B0YJ81 288 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 FANCGO15287 622 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PIAS1O75925 651 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PYGBP11216 843 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 GJA5P36382 358 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 CHI3L2Q15782 390 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 FAM187BQ17R55 369 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 SLC25A52Q3SY17 297 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ARHGAP15Q53QZ3 475 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 TTMPQ5BVD1 217 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 SAPCD2Q86UD0 394 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ARID3BQ8IVW6 561 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 YAF2Q8IY57 180 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 SLAIN1Q8ND83 568 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 LMO3Q8TAP4 145 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ERP27Q96DN0 273 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 TRHDEQ9UKU6 1024 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PPEF2O14830 753 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ADCY6O43306 1168 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 DNAJC6O75061 913 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 CHKAP35790 457 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 MGAT5Q09328 741 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 MPP3Q13368 585 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 FAM228AQ86W67 206 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 LGI2Q8N0V4 545 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ZNF558Q96NG5 402 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 CDHR5Q9HBB8 845 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 LATS2Q9NRM7 1088 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ETNK2Q9NVF9 386 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 HACD3Q9P035 362 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 C4AP0C0L4 1744 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 CCDC22O60826 627 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PPFIA2O75334 1257 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PAX3P23760 479 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 KLRC2P26717 231 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 HADHBP55084 474 aaKnown RBP14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PDE1CQ14123 709 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ZRANB3Q5FWF4 1079 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ANKRD20A2Q5SQ80 823 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ANKRD20A1Q5TYW2 823 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ANKS3Q6ZW76 656 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 LRRC8DQ7L1W4 858 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 SLC26A9Q7LBE3 791 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 PGM2Q96G03 612 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 LPIN3Q9BQK8 851 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 BRD8Q9H0E9 1235 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 DYRK4Q9NR20 520 aa14.56□□□□□ -0.08
SHROOM1-203ENST00000378679 A0A0A0MRY4 1105 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 MTA2O94776 668 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 TOMM70O94826 608 aa14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 LUC7L3O95232 432 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-203ENST00000378679 CYP3A5P20815 502 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms