RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 PGLYRP2Q96PD5 576 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 WWP1Q9H0M0 922 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 THAP1Q9NVV9 213 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.26□□□□□ -0.61
BEST1-201ENST00000378043 STOML1Q9UBI4 398 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 MORF4L1Q9UBU8 362 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 FZD10Q9ULW2 581 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 NUP205Q92621 2012 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 SDR42E2A6NKP2 422 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 PRR5-ARHGAP8B1AHC4 643 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 ADCY6O43306 1168 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 LYPLA1O75608 230 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 UPP2O95045 317 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 FGF3P11487 239 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 MLNP12872 115 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 ACADSP16219 412 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 SMPD1P17405 629 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 MGAT1P26572 445 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 GNL1P36915 607 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 GMPRP36959 345 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 MATKP42679 507 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 ARHGAP8P85298 464 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 KDSRQ06136 332 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 FBXO47Q5MNV8 452 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 TEDDM1Q5T9Z0 273 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 KYAT3Q6YP21 454 aaKnown RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 DEFB106AQ8N104 65 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CFAP61Q8NHU2 1237 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 DTX3LQ8TDB6 740 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 MICAL1Q8TDZ2 1067 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 P2RY11Q96G91 374 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CLPTM1LQ96KA5 538 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 IL1RAPL1Q9NZN1 696 aa11.26□□□□□ -0.61
BEST1-201ENST00000378043 CORO1CQ9ULV4 474 aaPredicted RBP11.26□□□□□ -0.61
BEST1-201ENST00000378043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 KPNA7A9QM74 516 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 RNF103O00237 685 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 TPP1O14773 563 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 NVLO15381 856 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 MAGEC1O60732 1142 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 MMP3P08254 477 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 HOXD8P13378 290 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 CNTFP26441 200 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 ARRB2P32121 409 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 VHLP40337 213 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 ALDH18A1P54886 795 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 SESN2P58004 480 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 WASHC5Q12768 1159 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 THOC5Q13769 683 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 UBAP2LQ14157 1087 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 SMAD1Q15797 465 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 SLC25A52Q3SY17 297 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 N4BP2L1Q5TBK1 243 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 LRRC8BQ6P9F7 803 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 CATSPER4Q7RTX7 472 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 OSMRQ99650 979 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 OSBPL1AQ9BXW6 950 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 STX18Q9P2W9 335 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 BPTFQ12830 3046 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 HACD1B0YJ81 288 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 PLIN3O60664 434 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 SERPINA6P08185 405 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 KCNA4P22459 653 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 FDFT1P37268 417 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 RPL10AP62906 217 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 SLC34A1Q06495 639 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 SOX4Q06945 474 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 OLIG2Q13516 323 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 RCN2Q14257 317 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 R3HDM1Q15032 1099 aaKnown RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 STXBP5Q5T5C0 1151 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 BNIPLQ7Z465 357 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 LIMS2Q7Z4I7 341 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 PIGZQ86VD9 579 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 FAM161BQ96MY7 647 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 APOL6Q9BWW8 343 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 GCOM2Q9BZD3 368 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 TRIM6Q9C030 488 aaPredicted RBP11.25□□□□□ -0.61
BEST1-201ENST00000378043 GOLGA2P5Q9HBQ8 144 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 XPNPEP3Q9NQH7 507 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 KLK14Q9P0G3 267 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 TAGLN3Q9UI15 199 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
BEST1-201ENST00000378043 SMIM28A0A1B0GU29 152 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 BEST1O76090 585 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PDHA1P08559 390 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PSMB4P28070 264 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 ARL4AP40617 200 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 SARNPP82979 210 aaKnown RBP11.24□□□□□ -0.61
BEST1-201ENST00000378043 ADIGQ0VDE8 80 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 PCLAFQ15004 111 aa11.24□□□□□ -0.61
BEST1-201ENST00000378043 CCDC6Q16204 474 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms