RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 CISD3P0C7P0 127 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 IRF1P10914 325 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 ATP5C1P36542 298 aaKnown RBP12.73□□□□□ -0.37
LSM2-208ENST00000375661 RAD23BP54727 409 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 UBASH3AP57075 661 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 GRIK2Q13002 908 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 STARD3Q14849 445 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 FILIP1LQ4L180 1135 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 ZNF394Q53GI3 561 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 KLHDC10Q6PID8 442 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 IL27RAQ6UWB1 636 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 TOGARAM2Q6ZUX3 1019 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 PDZD3Q86UT5 571 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 FUKQ8N0W3 1084 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 TTC39CQ8N584 583 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 ZMIZ2Q8NF64 920 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 WBP2Q969T9 261 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 NAA15Q9BXJ9 866 aaKnown RBP12.73□□□□□ -0.37
LSM2-208ENST00000375661 ITM2CQ9NQX7 267 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 WSB2Q9NYS7 404 aaPredicted RBP12.73□□□□□ -0.37
LSM2-208ENST00000375661 IFNKQ9P0W0 207 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 USP36Q9P275 1121 aaKnown RBP12.73□□□□□ -0.37
LSM2-208ENST00000375661 DKK4Q9UBT3 224 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 FBXO10Q9UK96 956 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 CNTN6Q9UQ52 1028 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 FHOD1Q9Y613 1164 aa12.73□□□□□ -0.37
LSM2-208ENST00000375661 FASNP49327 2511 aaKnown RBP12.72□□□□□ -0.37
LSM2-208ENST00000375661 MEI4A8MW99 385 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 CER1O95813 267 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 UCHL3P15374 230 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 TRIM21P19474 475 aaKnown RBP12.72□□□□□ -0.37
LSM2-208ENST00000375661 OXTRP30559 389 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 PBX1P40424 430 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 MFAP3P55082 362 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 YWHAEP62258 255 aaKnown RBP12.72□□□□□ -0.37
LSM2-208ENST00000375661 ENPP2Q13822 863 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 KIAA1324Q6UXG2 1013 aaKnown RBP12.72□□□□□ -0.37
LSM2-208ENST00000375661 TPGS1Q6ZTW0 290 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 ENOSF1Q7L5Y1 443 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 ZNF276Q8N554 614 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 C12orf29Q8N999 325 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 SHC3Q92529 594 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 TMEM176AQ96HP8 235 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 FAM81BQ96LP2 452 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 SMOQ99835 787 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 KRT82Q9NSB4 513 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 FAM207AQ9NSI2 230 aaPredicted RBP12.72□□□□□ -0.37
LSM2-208ENST00000375661 PCOLCE2Q9UKZ9 415 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 SCML2Q9UQR0 700 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 ZNF510Q9Y2H8 683 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 SLC27A6Q9Y2P4 619 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 PCDHGB2Q9Y5G2 931 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 STON1Q9Y6Q2 735 aa12.72□□□□□ -0.37
LSM2-208ENST00000375661 ANKRD11Q6UB99 2663 aaPredicted RBP12.71□□□□□ -0.37
LSM2-208ENST00000375661 A0A1W2PQC6 194 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 CALCAP01258 141 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 PLA2G4AP47712 749 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 SOWAHCQ53LP3 525 aaPredicted RBP12.71□□□□□ -0.37
LSM2-208ENST00000375661 Q6ZNB5 142 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 DBX2Q6ZNG2 339 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 TMPRSS7Q7RTY8 843 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 PNPLA1Q8N8W4 532 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
LSM2-208ENST00000375661 UCMAQ8WVF2 138 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 HEXIM2Q96MH2 286 aaKnown RBP12.71□□□□□ -0.37
LSM2-208ENST00000375661 CDC6Q99741 560 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 ZSWIM1Q9BR11 485 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 XPO4Q9C0E2 1151 aaKnown RBP12.71□□□□□ -0.37
LSM2-208ENST00000375661 PCED1AQ9H1Q7 454 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 PRDM16Q9HAZ2 1276 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 PNPLA8Q9NP80 782 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 CD93Q9NPY3 652 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 CACNA2D2Q9NY47 1150 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 RAD54BQ9Y620 910 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 TMEM131Q92545 1883 aa12.71□□□□□ -0.37
LSM2-208ENST00000375661 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.38
LSM2-208ENST00000375661 METTL12A8MUP2 240 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 FOXN3O00409 490 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 FLRT2O43155 660 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 BEST1O76090 585 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 TBX18O95935 607 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 IGLV3-19P01714 112 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 PAEPP09466 180 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 PNMA6AP0CW24 399 aaPredicted RBP12.7□□□□□ -0.38
LSM2-208ENST00000375661 NCAM1P13591 858 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 CCDC130P13994 396 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 MAOBP27338 520 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 CHKAP35790 457 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 MATKP42679 507 aa12.7□□□□□ -0.38
LSM2-208ENST00000375661 PSEN1P49768 467 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms