RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 AP4E1Q9UPM8 1137 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 A0A1B0GTW7 788 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 MSCO60682 206 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SUPT3HO75486 399 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 RALBP11234 206 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PTPRAP18433 802 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 EIF4BP23588 611 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
MCF2L-202ENST00000375597 STRA8Q7Z7C7 330 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 OR6Y1Q8NGX8 325 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 SEPT1Q8WYJ6 367 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 MFSD3Q96ES6 412 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 ELP3Q9H9T3 547 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 PCDH18Q9HCL0 1135 aa12.14□□□□□ -0.47
MCF2L-202ENST00000375597 DOCK5Q9H7D0 1870 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 TK2O00142 265 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 BPGMP07738 259 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 PMLP29590 882 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 ETV4P43268 484 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 RAB27AP51159 221 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 PLIN5Q00G26 463 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 NOMO1Q15155 1222 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CNPY1Q3B7I2 92 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CCDC14Q49A88 953 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 SLC9B1Q4ZJI4 515 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 SH2D4BQ5SQS7 431 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 TDRPQ86YL5 185 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 ZNF276Q8N554 614 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 EDEM1Q92611 657 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 SLC45A3Q96JT2 553 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CNPY3Q9BT09 278 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 FOXP3Q9BZS1 431 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 C10orf71Q711Q0 1435 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CCL22O00626 93 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 LTFP02788 710 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CYP3A5P20815 502 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 PDE1CQ14123 709 aaPredicted RBP12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CWF19L1Q69YN2 538 aaKnown RBP12.13□□□□□ -0.47
MCF2L-202ENST00000375597 MPZL3Q6UWV2 235 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 IFNEQ86WN2 208 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 PIWIL2Q8TC59 973 aaKnown RBP12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CDKL2Q92772 493 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 LRGUKQ96M69 825 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 XYLT2Q9H1B5 865 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 CYLDQ9NQC7 956 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 IARS2Q9NSE4 1012 aaKnown RBP12.13□□□□□ -0.47
MCF2L-202ENST00000375597 SNTG2Q9NY99 539 aa12.13□□□□□ -0.47
MCF2L-202ENST00000375597 SPDYE16A6NNV3 312 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 RNF103O00237 685 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 WFS1O76024 890 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 DESP17661 470 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 ARL4AP40617 200 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 RALGDSQ12967 914 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 CERCAMQ5T4B2 595 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NPAS2Q99743 824 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 THSD7AQ9UPZ6 1657 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 ATP8B3O60423 1300 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 TM7SF2O76062 418 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 ARL2P36404 184 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NDUFV1P49821 464 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 SULT1E1P49888 294 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NAGLUP54802 743 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 ART3Q13508 389 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 PCSK7Q16549 785 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 LRRC23Q53EV4 343 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 LENG8Q96PV6 779 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NT5C1AQ9BXI3 368 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NEMP2A6NFY4 417 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.475e-9■■■■■ 27.5
MCF2L-202ENST00000375597 LMO2P25791 158 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 SNRPFP62306 86 aaKnown RBP12.12□□□□□ -0.47
MCF2L-202ENST00000375597 FLOT2Q14254 428 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 TCEAL1Q15170 157 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 ANO4Q32M45 955 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 DHDDSQ86SQ9 333 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 DCUN1D5Q9BTE7 237 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 NRDE2Q9H7Z3 1164 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 TUBGCP4Q9UGJ1 667 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 DTNAQ9Y4J8 743 aa12.12□□□□□ -0.47
MCF2L-202ENST00000375597 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 MFSD11O43934 449 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 STAMBPO95630 424 aa12.11□□□□□ -0.47
MCF2L-202ENST00000375597 LSM8O95777 96 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms