RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 TCHHQ07283 1943 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NPHP3Q7Z494 1330 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 MOXD2PA6NHM9 499 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CRXO43186 299 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NUAK1O60285 661 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CNOT3O75175 753 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NQO1P15559 274 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 AVPR1AP37288 418 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NPEPPSP55786 919 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 BMT2Q1RMZ1 405 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 USPL1Q5W0Q7 1092 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SNRNP48Q6IEG0 339 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CYP2R1Q6VVX0 501 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF550Q7Z398 422 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TMC7Q7Z402 723 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZSCAN4Q8NAM6 433 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 METTL21AQ8WXB1 218 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 C5orf34Q96MH7 638 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PHB2Q99623 299 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 FAM217BQ9NTX9 383 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 LMBRD1Q9NUN5 540 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF214Q9UL59 606 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 BORCS7-ASMTA0A0B4J1R7 106 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 A0A1W2PQ72 361 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 DCDC2CA8MYV0 355 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 FAM227AF5H4B4 570 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SCGB1D2O95969 90 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 IL15P40933 162 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GCGRP47871 477 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NME5P56597 212 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KCNK10P57789 538 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CASP8Q14790 479 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 POM121L1PQ3SYA9 428 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SNX20Q7Z614 316 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 FAM124AQ86V42 546 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ALDH16A1Q8IZ83 802 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZBTB38Q8NAP3 1195 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GOLM1Q8NBJ4 401 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SLC7A14Q8TBB6 771 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 METTL6Q8TCB7 284 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ATL1Q8WXF7 558 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ING5Q8WYH8 240 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KCNJ9Q92806 393 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 BORCS7Q96B45 105 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SPATA33Q96N06 139 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CLIC6Q96NY7 704 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF341Q9BYN7 854 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 MRGBPQ9NV56 204 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NCDNQ9UBB6 729 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 RPAP1Q9BWH6 1393 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 FANCD2Q9BXW9 1451 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 POTEMA6NI47 508 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KCNJ18B7U540 433 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SCAMP3O14828 347 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 INPPL1O15357 1258 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PLIN3O60664 434 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CUTAO60888 179 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TRAPPC6AO75865 159 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 OR5F1O95221 314 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NR2C1P13056 603 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TARSP26639 723 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PSMC2P35998 433 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GNALP38405 381 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ILF3Q12906 894 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KCNJ12Q14500 433 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TTLL4Q14679 1199 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 MAPK11Q15759 364 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TTLL9Q3SXZ7 439 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CDONQ4KMG0 1287 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 CACHD1Q5VU97 1274 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 UGT3A1Q6NUS8 523 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NIPAL3Q6P499 406 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 POTEGQ6S5H5 508 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TMPRSS9Q7Z410 1059 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ZNF655Q8N720 491 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 MARCH10Q8NA82 808 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PCYOX1LQ8NBM8 494 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 LIN37Q96GY3 246 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ALPK1Q96QP1 1244 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PIGSQ96S52 555 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 ATF6BQ99941 703 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 MYRFQ9Y2G1 1151 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 AQRO60306 1485 aaKnown RBP eCLIP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GPR89AB7ZAQ6 455 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GRM8O00222 908 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KIAA0391O15091 583 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 OR1I1O60431 355 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TSPAN19P0C672 248 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 FAM153BP0C7A2 387 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GPR89BP0CG08 455 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PRKAR1AP10644 381 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 PCP11498 1178 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 IRF2P14316 349 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 GMFBP60983 142 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 SCAPQ12770 1279 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 NR6A1Q15406 480 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 TRADDQ15628 312 aa4.74□□□□□ -1.65
SCN1A-202ENST00000375405 KNOP1Q1ED39 458 aaKnown RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 LACTB2Q53H82 288 aaPredicted RBP4.74□□□□□ -1.65
SCN1A-202ENST00000375405 C6orf183Q5T699 404 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms