RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 LACTBL1A8MY62 500 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 HACD1B0YJ81 288 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 GOLGA8TH3BQL2 631 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 H3BRB1 525 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 CLOCKO15516 846 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 NPY2RP49146 381 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 NAB1Q13506 487 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 LY6KQ17RY6 165 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 NPNTQ6UXI9 565 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ARHGAP22Q7Z5H3 698 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TRAPPC12Q8WVT3 735 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 SPATA17Q96L03 361 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 DCUN1D5Q9BTE7 237 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TUT1Q9H6E5 874 aaKnown RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 CORO1CQ9ULV4 474 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 KIF13AQ9H1H9 1805 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ERI2A8K979 691 aaKnown RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 INPP4BO15327 924 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 CACHD1Q5VU97 1274 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 UGT3A1Q6NUS8 523 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ISLR2Q6UXK2 745 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 LRRC8DQ7L1W4 858 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ERO1BQ86YB8 467 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 PALB2Q86YC2 1186 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 FAM13CQ8NE31 585 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 LRRC4CQ9HCJ2 640 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TRPC7Q9HCX4 862 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ZC4H2Q9NQZ6 224 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TRHDEQ9UKU6 1024 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 MYRFQ9Y2G1 1151 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 FER1L4A9Z1Z3 1794 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TCRBV7S2A1N4TA0A589 114 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TPP1O14773 563 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ERVK-10P10266 1014 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 CYP2B6P20813 491 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ATP6V1B2P21281 511 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 RGS2P41220 211 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 OR1G1P47890 313 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 RAD23AP54725 363 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ZNF470Q6ECI4 717 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 C12orf56Q8IXR9 622 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 FITM2Q8N6M3 262 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 GANCQ8TET4 914 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 OTUB1Q96FW1 271 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 RNF157Q96PX1 679 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 TRIM45Q9H8W5 580 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
PTCH1-203ENST00000375274 SNTG2Q9NY99 539 aa11.81□□□□□ -0.52
PTCH1-203ENST00000375274 ASTN2O75129 1339 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 GSTT1P30711 240 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 HARS2P49590 506 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 BNIP1Q12981 228 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 C16orf72Q14CZ0 275 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 TTLL9Q3SXZ7 439 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 OTUD3Q5T2D3 398 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ILDR2Q71H61 639 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ARCQ7LC44 396 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CLVS1Q8IUQ0 354 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SNX31Q8N9S9 440 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 OSMRQ99650 979 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CINPQ9BW66 212 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 NT5MQ9NPB1 228 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 IMPAD1Q9NX62 359 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 BTBD7Q9P203 1132 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CRLS1Q9UJA2 301 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 R3HDM2Q9Y2K5 976 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 NR2E1Q9Y466 385 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 UBIAD1Q9Y5Z9 338 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ZMYM2Q9UBW7 1377 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SPATA31A6Q5VVP1 1343 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 TCRBV9S1A1TA0A576 114 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 PRPF4O43172 522 aaKnown RBP eCLIP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 PHGDHO43175 533 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 GLP2RO95838 553 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ABCG1P45844 678 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 ZNF143P52747 638 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SAMD4BQ5PRF9 694 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 OR5B17Q8NGF7 314 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 EDEM1Q92611 657 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 FOPNLQ96NB1 174 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SLC25A23Q9BV35 468 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 TMEM109Q9BVC6 243 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 PAIP1Q9H074 479 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 SPATC1LQ9H0A9 340 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 TMEM134Q9H6X4 195 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 A0A0A0MRY4 1105 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 CRABP2P29373 138 aa11.8□□□□□ -0.52
PTCH1-203ENST00000375274 RPL14P50914 215 aaKnown RBP11.8□□□□□ -0.52
PTCH1-203ENST00000375274 PLK1P53350 603 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms