RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 LHX1P48742 406 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 GLUD2P49448 558 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 MRPS5P82675 430 aaKnown RBP12.61□□□□□ -0.39
UBR4-203ENST00000375225 CA9Q16790 459 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 WASHC2DQ5SRD0 308 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 NCBP2-AS2Q69YL0 99 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 LRRC8BQ6P9F7 803 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 KYAT3Q6YP21 454 aaKnown RBP12.61□□□□□ -0.39
UBR4-203ENST00000375225 CAND1Q86VP6 1230 aaKnown RBP12.61□□□□□ -0.39
UBR4-203ENST00000375225 IGDCC3Q8IVU1 814 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 C7orf26Q96N11 449 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 FAM111AQ96PZ2 611 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 SRPK1Q96SB4 655 aaKnown RBP12.61□□□□□ -0.39
UBR4-203ENST00000375225 DPEP3Q9H4B8 488 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 YY1AP1Q9H869 796 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 TXNDC16Q9P2K2 825 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 SLC17A7Q9P2U7 560 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 PLLPQ9Y342 182 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 CDY2AQ9Y6F7 541 aa12.61□□□□□ -0.39
UBR4-203ENST00000375225 CAPN9O14815 690 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 DGKIO75912 1065 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 KRT16P08779 473 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 PGAM1P18669 254 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 AKAP5P24588 427 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 DEUP1Q05D60 604 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 IFRD2Q12894 506 aaPredicted RBP12.6□□□□□ -0.39
UBR4-203ENST00000375225 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 PRKD1Q15139 912 aaPredicted RBP12.6□□□□□ -0.39
UBR4-203ENST00000375225 TBCCQ15814 346 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 TAF1BQ53T94 588 aaPredicted RBP12.6□□□□□ -0.39
UBR4-203ENST00000375225 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
UBR4-203ENST00000375225 ANKRD20A2Q5SQ80 823 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 ANKRD20A1Q5TYW2 823 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 STEAP4Q687X5 459 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 LHX8Q68G74 356 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 UNC5AQ6ZN44 842 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 CRLF3Q8IUI8 442 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 DEFB106AQ8N104 65 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 RNF139Q8WU17 664 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 SREK1Q8WXA9 508 aaKnown RBP12.6□□□□□ -0.39
UBR4-203ENST00000375225 SPOCK2Q92563 424 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 WNT8BQ93098 351 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 E2F7Q96AV8 911 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 SERAC1Q96JX3 654 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 B3GNT5Q9BYG0 378 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 WBP1LQ9NX94 342 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 KCNK4Q9NYG8 393 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 DTLQ9NZJ0 730 aa12.6□□□□□ -0.39
UBR4-203ENST00000375225 ARHGEF37A1IGU5 675 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 ERI2A8K979 691 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 EEF2KO00418 725 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 CYB561D2O14569 222 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 PSMD3O43242 534 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 F9P00740 461 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 PTPN1P18031 435 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 MX2P20592 715 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 TARSP26639 723 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 CRHR1P34998 444 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 LILRA4P59901 499 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 GBE1Q04446 702 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 ADIGQ0VDE8 80 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 ZRSR2Q15696 482 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 DCAF6Q58WW2 860 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 FAXCQ5TGI0 409 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 FAM91A1Q658Y4 838 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 TWF2Q6IBS0 349 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 CASC4Q6P4E1 433 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 MARK2Q7KZI7 788 aaKnown RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 PIGZQ86VD9 579 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 NUDCD3Q8IVD9 361 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 TMEM130Q8N3G9 435 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 KIF2BQ8N4N8 673 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 COLGALT1Q8NBJ5 622 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 PPP1R14CQ8TAE6 165 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 TMEM40Q8WWA1 233 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 NTAN1Q96AB6 310 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 NSL1Q96IY1 281 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 SIGLEC10Q96LC7 697 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 OLFM3Q96PB7 478 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 KLF6Q99612 283 aaPredicted RBP12.59□□□□□ -0.39
UBR4-203ENST00000375225 WWP1Q9H0M0 922 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 STARD7Q9NQZ5 370 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.59□□□□□ -0.394e-8■■□□□ 13.1
UBR4-203ENST00000375225 HES2Q9Y543 173 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 IPPQ9Y573 584 aa12.59□□□□□ -0.39
UBR4-203ENST00000375225 A0A0G2JND7 137 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 A0A1W2PQ45 241 aaPredicted RBP12.58□□□□□ -0.4
UBR4-203ENST00000375225 A0A1W2PQY0 241 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 GLRA3O75311 464 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 AVILO75366 819 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 POLBP06746 335 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CTSHP09668 335 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 FGFR1P11362 822 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 GOT1P17174 413 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 CALB2P22676 271 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 AMPD1P23109 780 aa12.58□□□□□ -0.4
UBR4-203ENST00000375225 DNAJB2P25686 324 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms