RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 MAGEA3P43357 314 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 AP1B1Q10567 949 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 ARHGEF6Q15052 776 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 BEND5Q7L4P6 421 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 FAM193BQ96PV7 902 aaPredicted RBP20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TRABDQ9H4I3 376 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 MLXIPLQ9NP71 852 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 SNX10Q9Y5X0 201 aa20.21■□□□□ 0.83
HDAC1-201ENST00000373548 TCRBV9S1A1TA0A576 114 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 RNF103O00237 685 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 ENPP3O14638 875 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 IGLV3-25P01717 112 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 YWHAGP61981 247 aaKnown RBP eCLIP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 IFRD2Q12894 506 aaPredicted RBP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 BFSP2Q13515 415 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 PLEKHG4Q58EX7 1191 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 ADGRD1Q6QNK2 874 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 DENND5BQ6ZUT9 1274 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 CPLX4Q7Z7G2 160 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 KIF9Q9HAQ2 790 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 PPP1R12AO14974 1030 aaPredicted RBP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 PGFP49763 221 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 SRLQ86TD4 932 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 LRRC34Q8IZ02 419 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 CCNYQ8ND76 341 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 DCAKDQ8WVC6 231 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 DYDC1Q8WWB3 177 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 CYTH2Q99418 400 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 TRIM62Q9BVG3 475 aa20.2■□□□□ 0.82
HDAC1-201ENST00000373548 ELAC1Q9H777 363 aaKnown RBP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 ABI2Q9NYB9 513 aaPredicted RBP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 RRP15Q9Y3B9 282 aaKnown RBP20.2■□□□□ 0.82
HDAC1-201ENST00000373548 SPAG6O75602 509 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 WASHC5Q12768 1159 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 EIF4EBP2Q13542 120 aaPredicted RBP20.19■□□□□ 0.82
HDAC1-201ENST00000373548 NPWQ8N729 165 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 COLGALT1Q8NBJ5 622 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 CFAP36Q96G28 342 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 UNC93B1Q9H1C4 597 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 PLAC1Q9HBJ0 212 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 SENP1Q9P0U3 644 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 OR12D3Q9UGF7 316 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 NUP205Q92621 2012 aa20.19■□□□□ 0.82
HDAC1-201ENST00000373548 A0A1W2PPM1 405 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 DNM1LO00429 736 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 OPHN1O60890 802 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 TADA2AO75478 443 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 STK10O94804 968 aaKnown RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 FDFT1P37268 417 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 GRIA1P42261 906 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 MSH2P43246 934 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 GATMP50440 423 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SCD5Q86SK9 330 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SCN4BQ8IWT1 228 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 DCP1BQ8IZD4 617 aaKnown RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 EPAS1Q99814 870 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 CEP41Q9BYV8 373 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 NKIRAS1Q9NYS0 192 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 TRIM17Q9Y577 477 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 FAM47DPA6NHR8 397 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 F5H423 210 aaPredicted RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SPAG7O75391 227 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 C1QAP02745 245 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 TCTN1Q2MV58 587 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 KBTBD12Q3ZCT8 623 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 VARS2Q5ST30 1063 aaKnown RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 PDZD4Q76G19 769 aaPredicted RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 ABI1Q8IZP0 508 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 GDAP1Q8TB36 358 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 MZB1Q8WU39 189 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 CKAP2Q8WWK9 683 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 LRRC39Q96DD0 335 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SEC16BQ96JE7 1060 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SIGLEC10Q96LC7 697 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 ABCC13Q9NSE7 274 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SEPT10Q9P0V9 454 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 ZC3H7BQ9UGR2 993 aaKnown RBP20.18■□□□□ 0.82
HDAC1-201ENST00000373548 TTLL3Q9Y4R7 772 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 PCDHB7Q9Y5E2 793 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 RAD54BQ9Y620 910 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 FAM169AQ9Y6X4 670 aa20.18■□□□□ 0.82
HDAC1-201ENST00000373548 SCN5AQ14524 2016 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 SYN3O14994 580 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 IRAK2O43187 625 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 LRIG2O94898 1065 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 ZNF135P52742 658 aaPredicted RBP20.17■□□□□ 0.82
HDAC1-201ENST00000373548 BTBD8Q5XKL5 378 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 TAX1BP1Q86VP1 789 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 SPATS2Q86XZ4 545 aaKnown RBP20.17■□□□□ 0.82
HDAC1-201ENST00000373548 ZNF567Q8N184 647 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 C4orf33Q8N1A6 199 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 RNF34Q969K3 372 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 CASD1Q96PB1 797 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 FERMT1Q9BQL6 677 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 SEZ6LQ9BYH1 1024 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 XAB2Q9HCS7 855 aaKnown RBP20.17■□□□□ 0.82
HDAC1-201ENST00000373548 GGA2Q9UJY4 613 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 PRPF4O43172 522 aaKnown RBP eCLIP20.17■□□□□ 0.82
HDAC1-201ENST00000373548 HTRA3P83110 453 aa20.17■□□□□ 0.82
HDAC1-201ENST00000373548 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms