RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 GBP1P32455 592 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 TAX1BP1Q86VP1 789 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 PSTKQ8IV42 348 aaKnown RBP19.09■□□□□ 0.65
VEGFA-206ENST00000372077 CCDC185Q8N715 623 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 SLC22A17Q8WUG5 538 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 NTAN1Q96AB6 310 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 PRO3102Q9H379 93 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 SLC28A3Q9HAS3 691 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 FZD10Q9ULW2 581 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 CEP290O15078 2479 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 LRRD1A4D1F6 860 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 IRAK2O43187 625 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 SKOR1P84550 965 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 ZFYVE27Q5T4F4 411 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 ITIH5Q86UX2 942 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 GPATCH11Q8N954 259 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 CCDC26Q8TAB7 109 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 EPS8L3Q8TE67 593 aaKnown RBP19.09■□□□□ 0.65
VEGFA-206ENST00000372077 HERPUD2Q9BSE4 406 aa19.09■□□□□ 0.65
VEGFA-206ENST00000372077 OLA1Q9NTK5 396 aaKnown RBP19.09■□□□□ 0.65
VEGFA-206ENST00000372077 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.09■□□□□ 0.654e-7■■■■■ 28.5
VEGFA-206ENST00000372077 MTCL1Q9Y4B5 1905 aaKnown RBP19.08■□□□□ 0.65
VEGFA-206ENST00000372077 TNFRSF8P28908 595 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 CETN2P41208 172 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 CDKN2BP42772 138 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 MNAT1P51948 309 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 AIF1P55008 147 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 SLC29A2Q14542 456 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 PPP2R5EQ16537 467 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 HP1BP3Q5SSJ5 553 aaPredicted RBP19.08■□□□□ 0.65
VEGFA-206ENST00000372077 CCDC50Q8IVM0 306 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 KCTD6Q8NC69 237 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 ARNTL2Q8WYA1 636 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 OSBPL8Q9BZF1 889 aa19.08■□□□□ 0.65
VEGFA-206ENST00000372077 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.08■□□□□ 0.65
VEGFA-206ENST00000372077 UXTQ9UBK9 157 aaPredicted RBP19.08■□□□□ 0.65
VEGFA-206ENST00000372077 SYNJ2BP-COX16A0A087WUM0 186 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 PDK2Q15119 407 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 CA9Q16790 459 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 ZC3H12AQ5D1E8 599 aaKnown RBP19.08■□□□□ 0.64
VEGFA-206ENST00000372077 HEMGNQ9BXL5 484 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 GPATCH2LQ9NWQ4 482 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 COX16Q9P0S2 106 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 SFMBT1Q9UHJ3 866 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 NUDT5Q9UKK9 219 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 EFR3BQ9Y2G0 817 aa19.08■□□□□ 0.64
VEGFA-206ENST00000372077 ZNF840PA6NDX5 716 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 PPP3CCP48454 512 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 TAF12Q16514 161 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 DPYSL2Q16555 572 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 VSIG1Q86XK7 387 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 JAMLQ86YT9 394 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 AP4E1Q9UPM8 1137 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 hCG_1818297A0A087WSY0 165 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 LRG1P02750 347 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 CD48P09326 243 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 ADRA1BP35368 520 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 SMAD3P84022 425 aaKnown RBP19.07■□□□□ 0.64
VEGFA-206ENST00000372077 SCAPQ12770 1279 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 KLF1Q13351 362 aaPredicted RBP19.07■□□□□ 0.64
VEGFA-206ENST00000372077 MTM1Q13496 603 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 TFDP3Q5H9I0 405 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 CCDC105Q8IYK2 499 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 SERPINB11Q96P15 392 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 PCDH18Q9HCL0 1135 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 MTMR10Q9NXD2 777 aa19.07■□□□□ 0.64
VEGFA-206ENST00000372077 EPOPA6NHQ4 379 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ACSL3O95573 720 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 L1CAMP32004 1257 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CDH6P55285 790 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 SIX1Q15475 284 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 LRRC45Q96CN5 670 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 MRRFQ96E11 262 aaKnown RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ZNF512Q96ME7 567 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CDK5RAP1Q96SZ6 601 aaKnown RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 LRRC3Q9BY71 257 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 WDCPQ9H6R7 721 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ZNF334Q9HCZ1 680 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ANLNQ9NQW6 1124 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 TRPM5Q9NZQ8 1165 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ZNF487B1APH4 448 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 F11P03951 625 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CREB1P16220 341 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 RPL21P46778 160 aaKnown RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 DPYSL3Q14195 570 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CPLX4Q7Z7G2 160 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 TMEM150AQ86TG1 271 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 MAP7D3Q8IWC1 876 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 MAIP1Q8WWC4 291 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 IL21Q9HBE4 155 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 CD248Q9HCU0 757 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 ARHGEF38Q9NXL2 777 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 I6L893 689 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 TLR5O60602 858 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 IL4RP24394 825 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 HNRNPH1P31943 449 aaKnown RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 BRMS1LQ5PSV4 323 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 TAB3Q8N5C8 712 aaPredicted RBP19.06■□□□□ 0.64
VEGFA-206ENST00000372077 TIFAQ96CG3 184 aa19.06■□□□□ 0.64
VEGFA-206ENST00000372077 SLC39A13Q96H72 371 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms