RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SERPINB11Q96P15 392 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 HAPLN3Q96S86 360 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 RBM15Q96T37 977 aaKnown RBP eCLIP18.1■□□□□ 0.49
SSBP3-203ENST00000371319 EPAS1Q99814 870 aa18.1■□□□□ 0.49
SSBP3-203ENST00000371319 GOLGA6CA6NDK9 693 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 KCNU1A8MYU2 1149 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 C2CD2LO14523 706 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 GCATO75600 419 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM63AO94886 807 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 LRIG2O94898 1065 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 MYZAPP0CAP1 466 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 GOLGA6DP0CG33 693 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 CCR1P32246 355 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 MAGEA4P43358 317 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 GABPB1Q06547 395 aaPredicted RBP18.09■□□□□ 0.49
SSBP3-203ENST00000371319 TAF10Q12962 218 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 KCNJ11Q14654 390 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 KYNUQ16719 465 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 KIAA1841Q6NSI8 718 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 TP53INP2Q8IXH6 220 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 UHMK1Q8TAS1 419 aaKnown RBP18.09■□□□□ 0.49
SSBP3-203ENST00000371319 SLC39A13Q96H72 371 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM169Q96HH4 297 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 ATP6V1G3Q96LB4 118 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM109Q9BVC6 243 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 GOLGA6AQ9NYA3 693 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 CLIC5Q9NZA1 410 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 SPG21Q9NZD8 308 aa18.09■□□□□ 0.49
SSBP3-203ENST00000371319 C5orf60A6NFR6 353 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 SMAPO00193 183 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 PAGE1O75459 146 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 SEC24AO95486 1093 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 ACSL3O95573 720 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 ZDHHC11BP0C7U3 371 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 GLUD2P49448 558 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 BASP1P80723 227 aaKnown RBP18.08■□□□□ 0.49
SSBP3-203ENST00000371319 IFFO1Q0D2I5 559 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 KRT71Q3SY84 523 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 AGBL2Q5U5Z8 902 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 MANEALQ5VSG8 457 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 DDX53Q86TM3 631 aaKnown RBP18.08■□□□□ 0.49
SSBP3-203ENST00000371319 SH2D3CQ8N5H7 860 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 NPWQ8N729 165 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 CCDC110Q8TBZ0 833 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 FCRL2Q96LA5 508 aaPredicted RBP18.08■□□□□ 0.49
SSBP3-203ENST00000371319 LGMNQ99538 433 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 TTLL2Q9BWV7 592 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 PHACTR1Q9C0D0 580 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.08■□□□□ 0.49
SSBP3-203ENST00000371319 TMEM51Q9NW97 253 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 AFF4Q9UHB7 1163 aaKnown RBP18.08■□□□□ 0.49
SSBP3-203ENST00000371319 TLR6Q9Y2C9 796 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 RAD54BQ9Y620 910 aa18.08■□□□□ 0.49
SSBP3-203ENST00000371319 GOLGA6L10A6NI86 522 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 GOLGA8MH3BSY2 632 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 ALOX15BO15296 676 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 CHADO15335 359 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 ABLIM3O94929 683 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 HOXC13P31276 330 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 ACTN2P35609 894 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 MAGEA6P43360 314 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 PSEN1P49768 467 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 PDK1Q15118 436 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 FNBP1LQ5T0N5 605 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 KCTD16Q68DU8 428 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 C4orf22Q6V702 233 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 OTOP2Q7RTS6 562 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 HTR3CQ8WXA8 447 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 C9orf72Q96LT7 481 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 CEP295NLQ96MC4 621 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 TLR8Q9NR97 1041 aaKnown RBP18.08■□□□□ 0.48
SSBP3-203ENST00000371319 XPO7Q9UIA9 1087 aaKnown RBP18.08■□□□□ 0.48
SSBP3-203ENST00000371319 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 NR2E3Q9Y5X4 410 aa18.08■□□□□ 0.48
SSBP3-203ENST00000371319 HMGB1P1B2RPK0 211 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-203ENST00000371319 E7ESA3 106 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 FASTKD3Q14CZ7 662 aaKnown RBP18.07■□□□□ 0.48
SSBP3-203ENST00000371319 HEATR6Q6AI08 1181 aaKnown RBP18.07■□□□□ 0.48
SSBP3-203ENST00000371319 CENPUQ71F23 418 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 PDZD4Q76G19 769 aaPredicted RBP18.07■□□□□ 0.48
SSBP3-203ENST00000371319 FAM76AQ8TAV0 307 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 YME1L1Q96TA2 773 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 KLC2Q9H0B6 622 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 SIK2Q9H0K1 926 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 PRDM12Q9H4Q4 367 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 ETNK1Q9HBU6 452 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 RAB6BQ9NRW1 208 aa18.07■□□□□ 0.48
SSBP3-203ENST00000371319 OLA1Q9NTK5 396 aaKnown RBP18.07■□□□□ 0.48
SSBP3-203ENST00000371319 KIAA0100Q14667 2235 aaKnown RBP18.06■□□□□ 0.48
SSBP3-203ENST00000371319 CARNS1A5YM72 827 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 PPP1R12AO14974 1030 aaPredicted RBP18.06■□□□□ 0.48
SSBP3-203ENST00000371319 BANF1O75531 89 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 TBX18O95935 607 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 EN2P19622 333 aaPredicted RBP18.06■□□□□ 0.48
SSBP3-203ENST00000371319 EPHB2P29323 1055 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 HTR7P34969 479 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 TUFMP49411 452 aaKnown RBP18.06■□□□□ 0.48
SSBP3-203ENST00000371319 ARL4CP56559 192 aa18.06■□□□□ 0.48
SSBP3-203ENST00000371319 TBX4P57082 545 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms