RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 MTA1Q13330 715 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 CAMK2GQ13555 558 aaPredicted RBP16.8■□□□□ 0.28
VMA21-202ENST00000370361 UAP1L1Q3KQV9 507 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 KIAA0907Q7Z7F0 614 aaPredicted RBP16.8■□□□□ 0.28
VMA21-202ENST00000370361 SLC41A1Q8IVJ1 513 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 CCDC117Q8IWD4 279 aaPredicted RBP16.8■□□□□ 0.28
VMA21-202ENST00000370361 RGL4Q8IZJ4 473 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 OR2T3Q8NH03 318 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 TOE1Q96GM8 510 aaKnown RBP16.8■□□□□ 0.28
VMA21-202ENST00000370361 MKRN2Q9H000 416 aaKnown RBP16.8■□□□□ 0.28
VMA21-202ENST00000370361 SFMBT1Q9UHJ3 866 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 TLR6Q9Y2C9 796 aa16.8■□□□□ 0.28
VMA21-202ENST00000370361 PCDH15Q96QU1 1955 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 A0A1B0GTW7 788 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 MEI4A8MW99 385 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 H0Y626 953 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 ACSL4O60488 711 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 TRIM16O95361 564 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 EPHX1P07099 455 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 PABPC1P11940 636 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 HLA-FP30511 346 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 TPMTP51580 245 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 TBX4P57082 545 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 SFSWAPQ12872 951 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 ISM2Q6H9L7 571 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 PIP4P1Q86T03 277 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 KDM1BQ8NB78 822 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 HJURPQ8NCD3 748 aaPredicted RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 P2RY11Q96G91 374 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 MED15Q96RN5 788 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 INTS2Q9H0H0 1204 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 TMEM245Q9H330 911 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 SUN2Q9UH99 717 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 RWDD2AQ9UIY3 292 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 GGA2Q9UJY4 613 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 ASCC3Q8N3C0 2202 aaKnown RBP16.79■□□□□ 0.28
VMA21-202ENST00000370361 CACNA1EQ15878 2313 aa16.79■□□□□ 0.28
VMA21-202ENST00000370361 CHD8Q9HCK8 2581 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 GTPBP10A4D1E9 387 aaKnown RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 TMEM8BA6NDV4 472 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 RNF225M0QZC1 329 aaPredicted RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 MSI1O43347 362 aaKnown RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 ASLP04424 464 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 RGS7P49802 495 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 COPAP53621 1224 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 UBE2HP62256 183 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 PLEKHG6Q3KR16 790 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 FNDC3BQ53EP0 1204 aaKnown RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 PIK3R6Q5UE93 754 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 TMEM215Q68D42 235 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 IL27RAQ6UWB1 636 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 CHST9Q7L1S5 443 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 RRAGAQ7L523 313 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 MINDY1Q8N5J2 469 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 GTPBP2Q9BX10 602 aaKnown RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 SRRTQ9BXP5 876 aaKnown RBP16.78■□□□□ 0.28
VMA21-202ENST00000370361 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 SCML1Q9UN30 329 aa16.78■□□□□ 0.28
VMA21-202ENST00000370361 KRT5P13647 590 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 POLR2EP19388 210 aaKnown RBP16.77■□□□□ 0.28
VMA21-202ENST00000370361 PRKCHP24723 683 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 GPD2P43304 727 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 SNX16P57768 344 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 TTC31Q49AM3 519 aaPredicted RBP16.77■□□□□ 0.28
VMA21-202ENST00000370361 ARHGEF19Q8IW93 802 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 MFN1Q8IWA4 741 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 DEFB124Q8NES8 71 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 FIBINQ8TAL6 211 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 KAT5Q92993 513 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 KREMEN1Q96MU8 473 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 ZSWIM1Q9BR11 485 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 LHX5Q9H2C1 402 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 TMEM51Q9NW97 253 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 KIAA1468Q9P260 1216 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 CLEC4EQ9ULY5 219 aa16.77■□□□□ 0.28
VMA21-202ENST00000370361 KMT2BQ9UMN6 2715 aaPredicted RBP16.76■□□□□ 0.27
VMA21-202ENST00000370361 METTL12A8MUP2 240 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 BIN1O00499 593 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 CAPN9O14815 690 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 TSPAN3O60637 253 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 MOCS3O95396 460 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 APOEP02649 317 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 GLI1P08151 1106 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 ZNF883P0CG24 379 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 SLC2A3P11169 496 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 ST8SIA6P61647 398 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 ARID5BQ14865 1188 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 FAM133BQ5BKY9 247 aaKnown RBP16.76■□□□□ 0.27
VMA21-202ENST00000370361 MBLAC2Q68D91 279 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 TMEM110Q86TL2 294 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 ADIPOR2Q86V24 386 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 DEFB119Q8N690 84 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 DQX1Q8TE96 717 aaKnown RBP16.76■□□□□ 0.27
VMA21-202ENST00000370361 FAM149B1Q96BN6 582 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 GPR174Q9BXC1 333 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 SLC4A5Q9BY07 1137 aa16.76■□□□□ 0.27
VMA21-202ENST00000370361 SLC6A17Q9H1V8 727 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms