RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 LIMD1Q9UGP4 676 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 RRN3P2A6NIE6 340 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 SLC34A1Q06495 639 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 TMEM132BQ14DG7 1078 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CLVS1Q8IUQ0 354 aaPredicted RBP12.74□□□□□ -0.37
HCFC1-202ENST00000369984 ADGRF2Q8IZF7 708 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 SETD9Q8NE22 299 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 LRCH1Q9Y2L9 728 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 MYH13Q9UKX3 1938 aa12.74□□□□□ -0.37
HCFC1-202ENST00000369984 CYP27B1O15528 508 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 CCNT2O60583 730 aaKnown RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 MCCD1P59942 119 aaPredicted RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ERVK-24P63145 666 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 GRTP1Q5TC63 336 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 S100A13Q99584 98 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 FICDQ9BVA6 458 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 UNKQ9C0B0 810 aaKnown RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ACTR8Q9H981 624 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 THAP1Q9NVV9 213 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ACOT9Q9Y305 439 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 IFRD1O00458 451 aaPredicted RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 GAS2O43903 313 aaKnown RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 OR6B1O95007 311 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 HPCAL1P37235 193 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 TMPRSS6Q8IU80 811 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 OVOS2A0A0G2JMS6 1433 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 OVOS2A0A0J9YW53 1432 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 OVOS2Q6IE36 1432 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 MROH7Q68CQ1 1323 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 H7C4K7 107 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 AHCYL1O43865 530 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 VAV1P15498 845 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 IFNGR2P38484 337 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 CLEC10AQ8IUN9 316 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 MAGEB10Q96LZ2 347 aaPredicted RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 LOC100506127A0A0U1RQW1 187 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 RIBC2Q9H4K1 309 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 COQ6Q9Y2Z9 468 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ADRA2BP18089 450 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 TCF7P36402 384 aaPredicted RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 SKIV2L2P42285 1042 aaKnown RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 USP49Q70CQ1 688 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ZNF605Q86T29 641 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 MIB1Q86YT6 1006 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 EPB41L4BQ9H329 900 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 FKBP14Q9NWM8 211 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ETAA1Q9NY74 926 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 SPTLC1O15269 473 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 LTFP02788 710 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 WASHC2DQ5SRD0 308 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ZDHHC13Q8IUH4 622 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 HERC6Q8IVU3 1022 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 CPB2Q96IY4 423 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 RUSC1Q9BVN2 902 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 DGCR6LQ9BY27 220 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 AHSPQ9NZD4 102 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 CHKBQ9Y259 395 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 MAGEB16A2A368 324 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 B3GAT3O94766 335 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 ELOA2Q8IYF1 753 aaPredicted RBP12.73□□□□□ -0.37
HCFC1-202ENST00000369984 POMGNT2Q8NAT1 580 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 COLGALT1Q8NBJ5 622 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 DPY30Q9C005 99 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 PTPRHQ9HD43 1115 aa12.73□□□□□ -0.37
HCFC1-202ENST00000369984 YY1P25490 414 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 OSCP1Q8WVF1 389 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 FAM192AQ9GZU8 254 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CES2O00748 559 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 RPL10AP62906 217 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 SEZ6Q53EL9 994 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PCNX4Q63HM2 1172 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MNTQ99583 582 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MYO3AQ8NEV4 1616 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 C17orf102A2RUQ5 167 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 LDLRP01130 860 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 ANXA6P08133 673 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 ACO1P21399 889 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CYP2F1P24903 491 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 STRIP1Q5VSL9 837 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MTSS1LQ765P7 747 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 ZNF671Q8TAW3 534 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MMADHCQ9H3L0 296 aaPredicted RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CNOT7Q9UIV1 285 aaKnown RBP12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MYH1P12882 1939 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MYH4Q9Y623 1939 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 PRLRP16471 622 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 MSH3P20585 1137 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 CYP2A7P20853 494 aa12.72□□□□□ -0.37
HCFC1-202ENST00000369984 SRP54P61011 504 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms