RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ALFQ53S48 1182 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 KBTBD8Q8NFY9 601 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ASAP3Q8TDY4 903 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAR2Q96K12 515 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 VPS45Q9NRW7 570 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ARL8BQ9NVJ2 186 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 GABBR1Q9UBS5 961 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 AFF2P51816 1311 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 USP42Q9H9J4 1324 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 ARHGEF10O15013 1369 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 NDUFS3O75489 264 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 PCCAP05165 728 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM86B2P0C5J1 330 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 RRM2P31350 389 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 STIP1P31948 543 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 VBP1P61758 197 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FSTL1Q12841 308 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 BNIP1Q12981 228 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZNF268Q14587 947 aaPredicted RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 RRP1BQ14684 758 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 PCSK7Q16549 785 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 CA9Q16790 459 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ABCB5Q2M3G0 1257 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 C6orf52Q5T4I8 152 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM160B1Q5W0V3 765 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FRMD7Q6ZUT3 714 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 SGMS1Q86VZ5 419 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM228AQ86W67 206 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 OR8H3Q8N146 312 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZNF540Q8NDQ6 660 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 SPPL2AQ8TCT8 520 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 DCUN1D1Q96GG9 259 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 RSAD1Q9HA92 442 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 RAPGEFL1Q9UHV5 662 aa8.77□□□□□ -1.01
LCA5-201ENST00000369846 FAM208AQ9UK61 1670 aaKnown RBP8.77□□□□□ -1.01
LCA5-201ENST00000369846 ZNF609O15014 1411 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 FAM92AA1XBS5 289 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 BOLA2-SMG1P6H3BVE0 249 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 GNB5O14775 395 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 RAD17O75943 681 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 FYNP06241 537 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 GARTP22102 1010 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 AKT1P31749 480 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 MAPKAPK2P49137 400 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 FAAP100Q0VG06 881 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 DDX39BQ13838 428 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 KRT33BQ14525 404 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 C16orf46Q6P387 395 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 SPESP1Q6UW49 350 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.76□□□□□ -1.01
LCA5-201ENST00000369846 ZNF571Q7Z3V5 609 aaPredicted RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 APOPT1Q96IL0 206 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 RGS18Q9NS28 235 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 LRRC4BQ9NT99 713 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 PLCL2Q9UPR0 1127 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 NDUFAF1Q9Y375 327 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 FADS3Q9Y5Q0 445 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 IRF6O14896 467 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 PIAS1O75925 651 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 ELK3P41970 407 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 MCAMP43121 646 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 SYTL3Q4VX76 610 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 FIGNQ5HY92 759 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 CDKAL1Q5VV42 579 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 ARHGAP36Q6ZRI8 547 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 CHMP1BQ7LBR1 199 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 DPP10Q8N608 796 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 IPMKQ8NFU5 416 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 NACC2Q96BF6 587 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 ZNF668Q96K58 619 aaPredicted RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 GFM1Q96RP9 751 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 MMTAG2Q9BU76 263 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 SMARCAD1Q9H4L7 1026 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 VPS4AQ9UN37 437 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 DIP2CQ9Y2E4 1556 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 USP6P35125 1406 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 J3QRK9 145 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 POLRMTO00411 1230 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 MYL12BO14950 172 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 TPBGLP0DKB5 382 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 WARSP23381 471 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 CDK17Q00537 523 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 UBAP2LQ14157 1087 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 Q3C1V9 767 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 WDR72Q3MJ13 1102 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 KCNK18Q7Z418 384 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 ZNF605Q86T29 641 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 UBE2J2Q8N2K1 259 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 ITFG1Q8TB96 612 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 PIWIL2Q8TC59 973 aaKnown RBP8.76□□□□□ -1.01
LCA5-201ENST00000369846 FBXL8Q96CD0 374 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
LCA5-201ENST00000369846 CCDC115Q96NT0 180 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms