RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ZNF862O60290 1169 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TPBGLP0DKB5 382 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CXCL8P10145 99 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ARMCX4Q5H9R4 360 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TTC7BQ86TV6 843 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 SYTL5Q8TDW5 730 aaPredicted RBP16.29■□□□□ 0.2
COL17A1-202ENST00000369733 MBOAT7Q96N66 472 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 SH3GL1Q99961 368 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ZNRF3Q9ULT6 936 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 SCAF8Q9UPN6 1271 aaKnown RBP16.29■□□□□ 0.2
COL17A1-202ENST00000369733 USP20Q9Y2K6 914 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TRIM24O15164 1050 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ADRB2P07550 413 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 AMPD1P23109 780 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TWF1Q12792 350 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ITGADQ13349 1161 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 POU6F1Q14863 301 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ARCQ7LC44 396 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CLNKQ7Z7G1 428 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 RMND5AQ9H871 391 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ALOX15BO15296 676 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 NOL4O94818 638 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CAP2P40123 477 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 PPP3CCP48454 512 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 VAC14Q08AM6 782 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 UGT3A1Q6NUS8 523 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 KCNT2Q6UVM3 1135 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 NPNTQ6UXI9 565 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 RNPEPQ9H4A4 650 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ZNF682O95780 498 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CLCN3P51790 818 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CDH17Q12864 832 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TIGD7Q6NT04 549 aaPredicted RBP16.29■□□□□ 0.2
COL17A1-202ENST00000369733 RNF145Q96MT1 663 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 C1orf50Q9BV19 199 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 NOL6Q9H6R4 1146 aaKnown RBP16.29■□□□□ 0.2
COL17A1-202ENST00000369733 SLC17A7Q9P2U7 560 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ATRNO75882 1429 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 PDZK1P1A8MUH7 402 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 F9P00740 461 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CCDC130P13994 396 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CRABP2P29373 138 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 CCT8P50990 548 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ECM1Q16610 540 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 SYTL3Q4VX76 610 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 TTC27Q6P3X3 843 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 PLGRKTQ9HBL7 147 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 WDR70Q9NW82 654 aa16.29■□□□□ 0.2
COL17A1-202ENST00000369733 ZC3H4Q9UPT8 1303 aaKnown RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 GOLGA8TH3BQL2 631 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 PARNO95453 639 aaKnown RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 AKT1P31749 480 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 SHC3Q92529 594 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 FIG4Q92562 907 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 FAM53CQ9NYF3 392 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 C6orf203Q9P0P8 240 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 NCAM2O15394 837 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 VPS26AO75436 327 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 CYP3A4P08684 503 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 ERVK-10P10266 1014 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 UQCRBP14927 111 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 FECHP22830 423 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 SP100P23497 879 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 DMPKQ09013 629 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 RSBN1Q5VWQ0 802 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 LUZP2Q86TE4 346 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 STK32CQ86UX6 486 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 PLEKHA8Q96JA3 519 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 GPR63Q9BZJ6 419 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 MUC3BQ9H195 1237 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 POMKQ9H5K3 350 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 CNGB3Q9NQW8 809 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 BARX2Q9UMQ3 279 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 PCDHA11Q9Y5I1 949 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 IL1R1P14778 569 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 WASHC5Q12768 1159 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 ACVR2BQ13705 512 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 PGM5Q15124 567 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 GSTCDQ8NEC7 633 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 TUBGCP4Q9UGJ1 667 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 RSL24D1Q9UHA3 163 aaKnown RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 SPATA31A1Q5TZJ5 1347 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 FAM20BO75063 409 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 C6orf222P0C671 652 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 MYL4P12829 197 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 VAV1P15498 845 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 DGUOKQ16854 277 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
COL17A1-202ENST00000369733 CAMK1DQ8IU85 385 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 RAD54BQ9Y620 910 aa16.28■□□□□ 0.2
COL17A1-202ENST00000369733 TMEM131LA2VDJ0 1609 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 ADCY6O43306 1168 aa16.27■□□□□ 0.2
COL17A1-202ENST00000369733 LRPAP1P30533 357 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms