RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CYB5D1Q6P9G0 228 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 KCNMB4Q86W47 210 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 RNFT2Q96EX2 444 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 GAKO14976 1311 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 PLA2R1Q13018 1463 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 TYMPP19971 482 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 ITGAXP20702 1163 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 ITGA9Q13797 1035 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 PRAMEF19Q5SWL8 479 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 CACTIN-AS1Q8N1I8 211 aa18.58■□□□□ 0.56
SNX27-202ENST00000368841 GTF3C2Q8WUA4 911 aaPredicted RBP18.58■□□□□ 0.56
SNX27-202ENST00000368841 INPP4BO15327 924 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 OVOS1Q6IE37 1185 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 EXO5Q9H790 373 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ARMCX1Q9P291 453 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 A0A1B0GW55 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 TIMM44O43615 452 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L2P0CJ85 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L3P0CJ86 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L4P0CJ87 422 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L5P0CJ88 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L6P0CJ89 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4L7P0CJ90 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 SCTRP47872 440 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 CLYBLQ8N0X4 340 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MYOCQ99972 504 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 TBL1YQ9BQ87 522 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 TMBIM4Q9HC24 238 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DUX4Q9UBX2 424 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 LYVE1Q9Y5Y7 322 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 LHX1P48742 406 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 KBTBD12Q3ZCT8 623 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ZBTB10Q96DT7 871 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ZBTB45Q96K62 511 aaPredicted RBP18.57■□□□□ 0.56
SNX27-202ENST00000368841 BTBD9Q96Q07 612 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MAP3K14Q99558 947 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ADI1Q9BV57 179 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MRPS26Q9BYN8 205 aaKnown RBP18.57■□□□□ 0.56
SNX27-202ENST00000368841 TAGLN3Q9UI15 199 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 BTN3A1O00481 513 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 INSRRP14616 1297 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 CYP2A7P20853 494 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 CCNIQ14094 377 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 DDHD1Q8NEL9 900 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 SYT15Q9BQS2 421 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 LIMD1Q9UGP4 676 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 BTG3Q14201 252 aaPredicted RBP18.57■□□□□ 0.56
SNX27-202ENST00000368841 DDR2Q16832 855 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 NETO2Q8NC67 525 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 EMID1Q96A84 441 aaPredicted RBP18.57■□□□□ 0.56
SNX27-202ENST00000368841 MIR1-1HGQ9H1L0 117 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MFSD1Q9H3U5 465 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 COMMD8Q9NX08 183 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 TECPR2O15040 1411 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MYO3AQ8NEV4 1616 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 PTGES3LE9PB15 166 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ETS1P14921 441 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 ARMCX4Q5H9R4 360 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 FBXO47Q5MNV8 452 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 KLHL24Q6TFL4 600 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 FAM205AQ6ZU69 1335 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 SPATA20Q8TB22 786 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 MIEF2Q96C03 454 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 CHKBQ9Y259 395 aa18.57■□□□□ 0.56
SNX27-202ENST00000368841 LACTBL1A8MY62 500 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 KPNA3O00505 521 aaPredicted RBP18.56■□□□□ 0.56
SNX27-202ENST00000368841 CES2O00748 559 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 VPS72Q15906 364 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 HLA-DQA1Q5Y7H0 255 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SOHLH2Q9NX45 425 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SAE1Q9UBE0 346 aaPredicted RBP18.56■□□□□ 0.56
SNX27-202ENST00000368841 F8VZ95 297 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 UBDO15205 165 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 PGM5Q15124 567 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 C4orf22Q6V702 233 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SLC41A1Q8IVJ1 513 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 VTI1BQ9UEU0 232 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 GTF3C4Q9UKN8 822 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 MFSD10Q14728 455 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 INAQ16352 499 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 KLHL17Q6TDP4 642 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 DCUN1D5Q9BTE7 237 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 PHACTR1Q9C0D0 580 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 ATP9AO75110 1047 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 WDR49Q8IV35 697 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 CSGALNACT1Q8TDX6 532 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 RAD21L1Q9H4I0 556 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 CCDC167Q9P0B6 97 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 FAM50BQ9Y247 325 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SESN1Q9Y6P5 492 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 PSMD11O00231 422 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 PTPN11Q06124 597 aaPredicted RBP18.56■□□□□ 0.56
SNX27-202ENST00000368841 ZNF621Q6ZSS3 439 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 DSG4Q86SJ6 1040 aa18.56■□□□□ 0.56
SNX27-202ENST00000368841 SEMA4BQ9NPR2 832 aaPredicted RBP18.56■□□□□ 0.56
SNX27-202ENST00000368841 ZSCAN5CA6NGD5 496 aaPredicted RBP18.55■□□□□ 0.56
SNX27-202ENST00000368841 TSPAN8P19075 237 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 ZNF618Q5T7W0 954 aa18.55■□□□□ 0.56
SNX27-202ENST00000368841 KCNQ5Q9NR82 932 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms