RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 RUNX3Q13761 415 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ACAP1Q15027 740 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 HADHQ16836 314 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ODF2Q5BJF6 829 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 BRMS1LQ5PSV4 323 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 OTUD1Q5VV17 481 aaPredicted RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 CWF19L1Q69YN2 538 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 TPRG1Q6ZUI0 275 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 FLCNQ8NFG4 579 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ATRIPQ8WXE1 791 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 FCRL2Q96LA5 508 aaPredicted RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 TKTL2Q9H0I9 626 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 KCNH6Q9H252 994 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ZWILCHQ9H900 591 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 DUS2Q9NX74 493 aaKnown RBP13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PYCARDQ9ULZ3 195 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 ZNF510Q9Y2H8 683 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 PIAS3Q9Y6X2 628 aa13.13□□□□□ -0.31
EFNA1-201ENST00000368406 COL4A2P08572 1712 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 TICRRQ7Z2Z1 1910 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 E2F8A0AVK6 867 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 SHISA7A6NL88 538 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 BUB1BO60566 1050 aaPredicted RBP13.12□□□□□ -0.31
EFNA1-201ENST00000368406 MAN1A1P33908 653 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 CXCR3P49682 368 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 HDAC4P56524 1084 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 TNK2Q07912 1038 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 MTA1Q13330 715 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 PPP2R5DQ14738 602 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 TCEAL1Q15170 157 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 EFHC2Q5JST6 749 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 DAB2IPQ5VWQ8 1189 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 C11orf63Q6NUN7 778 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
EFNA1-201ENST00000368406 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 SYCE1Q8N0S2 351 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 NIPA2Q8N8Q9 360 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 PJA1Q8NG27 643 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 ATP2A3Q93084 1043 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 BTN2A3PQ96KV6 586 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 PRRX2Q99811 253 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 DDX50Q9BQ39 737 aaKnown RBP13.12□□□□□ -0.31
EFNA1-201ENST00000368406 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 HPS4Q9NQG7 708 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 CALCOCO1Q9P1Z2 691 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 TBC1D14Q9P2M4 693 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 WNT6Q9Y6F9 365 aa13.12□□□□□ -0.31
EFNA1-201ENST00000368406 TYW5A2RUC4 315 aaKnown RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 GOLGA6L9A6NEM1 432 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 LRCH4O75427 683 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 IGLV3-27P01718 113 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 MIPP30301 263 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 CTHP32929 405 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 SLC1A1P43005 524 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 HADHBP55084 474 aaKnown RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 AMPD2Q01433 879 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 EML3Q32P44 896 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 BBS7Q8IWZ6 715 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 ZNF687Q8N1G0 1237 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 RNF10Q8N5U6 811 aaKnown RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 CCDC185Q8N715 623 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 TMEM105Q8N8V8 129 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 TPCN2Q8NHX9 752 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 FAM3CQ92520 227 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 CENPIQ92674 756 aaPredicted RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 OTUB2Q96DC9 234 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 SLC39A13Q96H72 371 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 SIK2Q9H0K1 926 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 LTB4R2Q9NPC1 389 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 AGO1Q9UL18 857 aaKnown RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 USP18Q9UMW8 372 aa13.11□□□□□ -0.31
EFNA1-201ENST00000368406 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
EFNA1-201ENST00000368406 OTOL1A6NHN0 477 aaPredicted RBP13.1□□□□□ -0.31
EFNA1-201ENST00000368406 FAM170BA6NMN3 283 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 F5H5T6 163 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 SPECC1L-ADORA2AF8WAN1 911 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 NCAM2O15394 837 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 PI15O43692 258 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ACSL4O60488 711 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 PALMO75781 387 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ENDOD1O94919 500 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 LATS1O95835 1130 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 ARSAP15289 507 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 COMTP21964 271 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 PCK1P35558 622 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 NR1H3Q13133 447 aa13.1□□□□□ -0.31
EFNA1-201ENST00000368406 SMTNL2Q2TAL5 461 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms