RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 TMEM53Q6P2H8 277 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 TTC30AQ86WT1 665 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 RASGEF1CQ8N431 466 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 WDTC1Q8N5D0 677 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 TRPV1Q8NER1 839 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 RUBCNQ92622 972 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 TTC1Q99614 292 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 ZBED2Q9BTP6 218 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 GJD2Q9UKL4 321 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 SATB2Q9UPW6 733 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 DFFAO00273 331 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 CES2O00748 559 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 BANF1O75531 89 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 SLC4A1P02730 911 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 PROZP22891 400 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 TPI1P60174 286 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 YWHAZP63104 245 aaKnown RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 BTKQ06187 659 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 HIC1Q14526 733 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 CCNG2Q16589 344 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 HIF1AQ16665 826 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 KATNAL2Q8IYT4 538 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 RIBC1Q8N443 379 aaPredicted RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 BHMTQ93088 406 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 SCLYQ96I15 445 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 B3GALT6Q96L58 329 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 FAM129AQ9BZQ8 928 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 CDC42EP4Q9H3Q1 356 aaKnown RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 XPO7Q9UIA9 1087 aaKnown RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 RGPD3A6NKT7 1758 aaPredicted RBP9.46□□□□□ -0.89
CALD1-202ENST00000361901 RGPD4Q7Z3J3 1758 aa9.46□□□□□ -0.89
CALD1-202ENST00000361901 TBKBP1A7MCY6 615 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SCAMP3O14828 347 aaKnown RBP9.46□□□□□ -0.9
CALD1-202ENST00000361901 FKTNO75072 461 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SHBGP04278 402 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 EPHB2P29323 1055 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 ACADSBP45954 432 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 CCR3P51677 355 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 ARL4CP56559 192 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SLC39A12Q504Y0 691 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 RAB6CQ53S08 254 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 LCLAT1Q6UWP7 414 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 LRIG3Q6UXM1 1119 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 TMC3Q7Z5M5 1100 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 ANKRD52Q8NB46 1076 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 RAB6CQ9H0N0 254 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 NR2E3Q9Y5X4 410 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SRRM3A6NNA2 597 aaPredicted RBP9.46□□□□□ -0.9
CALD1-202ENST00000361901 INHBAP08476 426 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 ATP5DP30049 168 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 MAGEA4P43358 317 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 LHX1P48742 406 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 PDZD4Q76G19 769 aaPredicted RBP9.46□□□□□ -0.9
CALD1-202ENST00000361901 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 IQCKQ8N0W5 287 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 ARHGAP24Q8N264 748 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 AGGF1Q8N302 714 aaeCLIP9.46□□□□□ -0.97e-7■■■□□ 15.8
CALD1-202ENST00000361901 PIP4K2CQ8TBX8 421 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SCG3Q8WXD2 468 aaKnown RBP9.46□□□□□ -0.9
CALD1-202ENST00000361901 SYT11Q9BT88 431 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 SNRNP25Q9BV90 132 aaKnown RBP9.46□□□□□ -0.9
CALD1-202ENST00000361901 OSBPL10Q9BXB5 764 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 NFKBIZQ9BYH8 718 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 KATNBL1Q9H079 304 aa9.46□□□□□ -0.9
CALD1-202ENST00000361901 RASA4BC9J798 803 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 EEF2KO00418 725 aaKnown RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 FSCN2O14926 492 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 RASA4O43374 803 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 TARSP26639 723 aaKnown RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 IL1R2P27930 398 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CHKAP35790 457 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CTXN3Q4LDR2 81 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 AGBL2Q5U5Z8 902 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 PPM1NQ8N819 430 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 ERP27Q96DN0 273 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 LRRC37BQ96QE4 947 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 SH3GL1Q99961 368 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 KLC2Q9H0B6 622 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 ATP8B3O60423 1300 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 PAPSS1O43252 624 aaPredicted RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 NPR3P17342 541 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CYP2F1P24903 491 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 ZNF143P52747 638 aaPredicted RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 CLDN10P78369 228 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 LRRC36Q1X8D7 754 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CNPY1Q3B7I2 92 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 C6orf118Q5T5N4 469 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 DBF4BQ8NFT6 615 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CELF6Q96J87 481 aaKnown RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 DNAJC1Q96KC8 554 aaKnown RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 TBCBQ99426 244 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 PABPC3Q9H361 631 aaKnown RBP9.45□□□□□ -0.9
CALD1-202ENST00000361901 WDCPQ9H6R7 721 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 DCLRE1BQ9H816 532 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 MIOSQ9NXC5 875 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 ANGPTL2Q9UKU9 493 aa9.45□□□□□ -0.9
CALD1-202ENST00000361901 CARD8Q9Y2G2 431 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms