RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 RPL9P32969 192 aaKnown RBP23.33■■□□□ 1.32
LDB1-201ENST00000361198 CAP1Q01518 475 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 BANPQ8N9N5 519 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 MCUQ8NE86 351 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 HTR3CQ8WXA8 447 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 PLAC1Q9HBJ0 212 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 CDH9Q9ULB4 789 aa23.33■■□□□ 1.32
LDB1-201ENST00000361198 C2CD2LO14523 706 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 CAPN9O14815 690 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 C1QAP02745 245 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 USP17L7P0C7H9 530 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 CCND3P30281 292 aaPredicted RBP23.32■■□□□ 1.32
LDB1-201ENST00000361198 SLC7A14Q8TBB6 771 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 SLC44A1Q8WWI5 657 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 KLF6Q99612 283 aaPredicted RBP23.32■■□□□ 1.32
LDB1-201ENST00000361198 RHOBTB2Q9BYZ6 727 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 VPS11Q9H270 941 aa23.32■■□□□ 1.32
LDB1-201ENST00000361198 ZC3H7BQ9UGR2 993 aaKnown RBP23.32■■□□□ 1.32
LDB1-201ENST00000361198 GOLGA8RI6L899 631 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 ZNF623O75123 536 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 FBXO21O94952 628 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 GBP2P32456 591 aaPredicted RBP23.31■■□□□ 1.32
LDB1-201ENST00000361198 PTK7Q13308 1070 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 RAB41Q5JT25 222 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 RTP3Q9BQQ7 232 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 PNPLA8Q9NP80 782 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 CNGB3Q9NQW8 809 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 TTLL3Q9Y4R7 772 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 TRAFD1O14545 582 aaPredicted RBP23.31■■□□□ 1.32
LDB1-201ENST00000361198 ADRA1DP25100 572 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 GRIA1P42261 906 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 MAGEA3P43357 314 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 SLC7A6OSQ96CW6 309 aaPredicted RBP23.31■■□□□ 1.32
LDB1-201ENST00000361198 ANLNQ9NQW6 1124 aa23.31■■□□□ 1.32
LDB1-201ENST00000361198 ABT1Q9ULW3 272 aaKnown RBP23.31■■□□□ 1.32
LDB1-201ENST00000361198 HHLA1C9JL84 531 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 H3BRJ5 948 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 B3GAT3O94766 335 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 TPSB2P20231 275 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 TARSP26639 723 aaKnown RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 TPSAB1Q15661 275 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 ANKRD20A2Q5SQ80 823 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 ANKRD20A1Q5TYW2 823 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 ANKRD20A3Q5VUR7 823 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 BZW1Q7L1Q6 419 aaKnown RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 TCP10LQ8TDR4 215 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 WDR6Q9NNW5 1121 aaKnown RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 PTCH2Q9Y6C5 1203 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 IKBKGQ9Y6K9 419 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 A0A0U1RQF3 1178 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 HACD1B0YJ81 288 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 I6L893 689 aaPredicted RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 AMHP03971 560 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 INHBAP08476 426 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 BRCC3P46736 316 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 CCNG1P51959 295 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 FAAP100Q0VG06 881 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 SEMA5AQ13591 1074 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 LPIN1Q14693 890 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 CCSAPQ6IQ19 270 aaPredicted RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 DENND5BQ6ZUT9 1274 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 KLHDC9Q8NEP7 349 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 RSRC1Q96IZ7 334 aaKnown RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 SIGLEC10Q96LC7 697 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 TRIM56Q9BRZ2 755 aaKnown RBP23.3■■□□□ 1.32
LDB1-201ENST00000361198 HAO1Q9UJM8 370 aa23.3■■□□□ 1.32
LDB1-201ENST00000361198 F5H423 210 aaPredicted RBP23.29■■□□□ 1.32
LDB1-201ENST00000361198 FAM72CH0Y354 149 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 RPLP2P05387 115 aaKnown RBP23.29■■□□□ 1.32
LDB1-201ENST00000361198 NCAM1P13591 858 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 PCSK1P29120 753 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 ADRA1BP35368 520 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 FAM72AQ5TYM5 149 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 FAM72DQ6L9T8 149 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 FAM72BQ86X60 149 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 HASPINQ8TF76 798 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 SMARCD1Q96GM5 515 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 C12orf65Q9H3J6 166 aaKnown RBP23.29■■□□□ 1.32
LDB1-201ENST00000361198 TDRD15B5MCY1 1934 aaKnown RBP23.29■■□□□ 1.32
LDB1-201ENST00000361198 A0A0A0MRY4 1105 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 IQANK1A0A1B0GTG1 560 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 RPSAP08865 295 aaKnown RBP23.29■■□□□ 1.32
LDB1-201ENST00000361198 RASSF2P50749 326 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 AP1B1Q10567 949 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 DPYSQ14117 519 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 DSC3Q14574 896 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 PLEKHG4Q58EX7 1191 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 RFX8Q6ZV50 586 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 NLRP9Q7RTR0 991 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 TP53INP2Q8IXH6 220 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 MPP5Q8N3R9 675 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 MAB21L3Q8N8X9 362 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 MYLPFQ96A32 169 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 LRRC39Q96DD0 335 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 SPATA13Q96N96 652 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 ADAM2Q99965 735 aa23.29■■□□□ 1.32
LDB1-201ENST00000361198 CXorf49A8MYA2 514 aaPredicted RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 C9IYK1 514 aa23.28■■□□□ 1.32
LDB1-201ENST00000361198 EEF2KO00418 725 aaKnown RBP23.28■■□□□ 1.32
LDB1-201ENST00000361198 FAM155BO75949 473 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms