RNA–Protein interactions for RNA: ENST00000360779.3

SDCBP2-202, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-202ENST00000360779 FAM72BQ86X60 149 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 PCDH19Q8TAB3 1148 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 FAM71BQ8TC56 605 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 TBC1D31Q96DN5 1066 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 RUNDC3BQ96NL0 473 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 APOL5Q9BWW9 433 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 LRRC3Q9BY71 257 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 RNF38Q9H0F5 515 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 PRDM12Q9H4Q4 367 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 GKN1Q9NS71 199 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 XPO7Q9UIA9 1087 aaKnown RBP17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 LSM7Q9UK45 103 aaKnown RBP17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 R3HDM2Q9Y2K5 976 aaKnown RBP17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 CPQQ9Y646 472 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 HS3ST4Q9Y661 456 aa17.17■□□□□ 0.34
SDCBP2-202ENST00000360779 ZNF197O14709 1029 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 MCF2LO15068 1137 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 TGM2P21980 687 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 SLC11A2P49281 568 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 MRPS25P82663 173 aaKnown RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 OTUD4Q01804 1114 aaKnown RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 SIX1Q15475 284 aaPredicted RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 TEAD2Q15562 447 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 RAP1GAP2Q684P5 730 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 CCDC137Q6PK04 289 aaKnown RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 NPNTQ6UXI9 565 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 GSTA5Q7RTV2 222 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 TSC1Q92574 1164 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 TCEAL4Q96EI5 215 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 PRO3102Q9H379 93 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 MRPS23Q9Y3D9 190 aaKnown RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 H7C0C1 242 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 I6L893 689 aaPredicted RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 APOC4-APOC2K7ER74 178 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 LRIG2O94898 1065 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 APOC2P02655 101 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 IL4RP24394 825 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 DDX6P26196 483 aaKnown RBP eCLIP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 CORO1AP31146 461 aaKnown RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 AVPR1AP37288 418 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 ATP5OP48047 213 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 DR1Q01658 176 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 CCNG2Q16589 344 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 STXBP5Q5T5C0 1151 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 DENND1CQ8IV53 801 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 ZDHHC14Q8IZN3 488 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 ACTL9Q8TC94 416 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 GRK7Q8WTQ7 553 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 FAF2Q96CS3 445 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 LRRC1Q9BTT6 524 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 KLF16Q9BXK1 252 aaPredicted RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 CATSPERBQ9H7T0 1116 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 ARHGEF4Q9NR80 690 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 SAE1Q9UBE0 346 aaPredicted RBP17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 AMACRQ9UHK6 382 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 VANGL2Q9ULK5 521 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 ZNF148Q9UQR1 794 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 SH3BP1Q9Y3L3 701 aa17.16■□□□□ 0.34
SDCBP2-202ENST00000360779 CLUHO75153 1309 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 A0A1W2PPC1 479 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 E9PAM4 449 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 ACSL4O60488 711 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 IGLV3-27P01718 113 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 PECAM1P16284 738 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 ERCC2P18074 760 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 CCR2P41597 374 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 KCNJ1P48048 391 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 FNTAP49354 379 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 EIF3EP60228 445 aaKnown RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 PPP1R7Q15435 360 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 ELF2Q15723 593 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 PIK3R6Q5UE93 754 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 SLC9A4Q6AI14 798 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 PQLC3Q8N755 202 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 C12orf50Q8NA57 414 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 ING5Q8WYH8 240 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 ZNF707Q96C28 371 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 SLC22A12Q96S37 553 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 FRMD8P1Q9BZ68 369 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 PRDM16Q9HAZ2 1276 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 COLQQ9Y215 455 aaPredicted RBP17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 CEP290O15078 2479 aa17.15■□□□□ 0.34
SDCBP2-202ENST00000360779 F5H5T6 163 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 RAD51CO43502 376 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 LIASO43766 372 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 STC2O76061 302 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 MAP3K6O95382 1288 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 ECEL1O95672 775 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 POU2F2P09086 479 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 HTR7P34969 479 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 HCAR3P49019 387 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 EPHA5P54756 1037 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 SLC7A5Q01650 507 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 HYAL1Q12794 435 aa17.14■□□□□ 0.33
SDCBP2-202ENST00000360779 BYSLQ13895 437 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms