RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FAM50BQ9Y247 325 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 C15orf38-AP3S2A0A0A6YYH1 394 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 RAMP2O60895 175 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 AKAP5P24588 427 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 NTSP30990 170 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 FLT3P36888 993 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 SERPINB5P36952 375 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 CLK3P49761 638 aaKnown RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 PKN1Q16512 942 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ARPINQ7Z6K5 226 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 TMC2Q8TDI7 906 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 EHD4Q9H223 541 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 PCM1Q15154 2024 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 HACD1B0YJ81 288 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 NDUFS2O75306 463 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 PBLDP30039 288 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 STK4Q13043 487 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ITGADQ13349 1161 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 MIB1Q86YT6 1006 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 CACTIN-AS1Q8N1I8 211 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 A0A0A6YYK5 440 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 DGKIO75912 1065 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 KLRC1P26715 233 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 CHRNA5P30532 468 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 STRA8Q7Z7C7 330 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 NMRAL1Q9HBL8 299 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 TAGLN3Q9UI15 199 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 OR1E1P30953 314 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 HK2P52789 917 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 UBA3Q8TBC4 463 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 AGPAT5Q9NUQ2 364 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 INTS7Q9NVH2 962 aaKnown RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 POLR2EP19388 210 aaKnown RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 CYP2F1P24903 491 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 FRG1Q14331 258 aaKnown RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 TMC7Q7Z402 723 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 VN1R5Q7Z5H4 357 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ALKQ9UM73 1620 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 MANSC4A6NHS7 340 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 RBAK-RBAKDNI3L0D1 243 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 PRLRP16471 622 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ITGAXP20702 1163 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 RHOAP61586 193 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 RCN1Q15293 331 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 KCNT1Q5JUK3 1230 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 MMADHCQ9H3L0 296 aaPredicted RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 ABCC3O15438 1527 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 TNNI3P19429 210 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 TARSP26639 723 aaKnown RBP9.9□□□□□ -0.82
CUX1-203ENST00000360264 STAT5AP42229 794 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 MAPK9P45984 424 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 ERO1BQ86YB8 467 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 C9orf16Q9BUW7 83 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 PCDH9Q9HC56 1237 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 POLD4Q9HCU8 107 aa9.9□□□□□ -0.82
CUX1-203ENST00000360264 CYP7B1O75881 506 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 VTNP04004 478 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 FOXO4P98177 505 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 RBM43Q6ZSC3 357 aaKnown RBP9.9□□□□□ -0.83
CUX1-203ENST00000360264 CSGALNACT1Q8TDX6 532 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 CIPCQ9C0C6 399 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 CAAP1Q9H8G2 361 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 LDOC1O95751 146 aaPredicted RBP9.9□□□□□ -0.83
CUX1-203ENST00000360264 PTPN11Q06124 597 aaPredicted RBP9.9□□□□□ -0.83
CUX1-203ENST00000360264 ZNF410Q86VK4 478 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 ANKS1AQ92625 1134 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 ZBTB14O43829 449 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 CPA3P15088 417 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 TFE3P19532 575 aaPredicted RBP9.9□□□□□ -0.83
CUX1-203ENST00000360264 FAM172AQ8WUF8 416 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 FICDQ9BVA6 458 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 FAIM2Q9BWQ8 316 aa9.9□□□□□ -0.83
CUX1-203ENST00000360264 TBKBP1A7MCY6 615 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 PDE5AO76074 875 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 EPS8Q12929 822 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 PXMP2Q9NR77 195 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 TMX2Q9Y320 296 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ASGR1P07306 291 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 SMIM11AP58511 58 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ZCWPW2Q504Y3 356 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 FBXO33Q7Z6M2 555 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 EFCAB10A6NFE3 127 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 FAM83AQ86UY5 434 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ACTRT2Q8TDY3 377 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 DLG3Q92796 817 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 DCLK3Q9C098 648 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 HDHD2Q9H0R4 259 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 PIPSLA2A3N6 862 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 AVILO75366 819 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 HSMCR30P0CW71 290 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 HOXB6P17509 224 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 GRIK3Q13003 919 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 DDX39BQ13838 428 aaKnown RBP9.89□□□□□ -0.83
CUX1-203ENST00000360264 ACAP1Q15027 740 aa9.89□□□□□ -0.83
CUX1-203ENST00000360264 GATAD2AQ86YP4 633 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms