RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 GPBP1Q86WP2 473 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PARP8Q8N3A8 854 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TMEM151AQ8N4L1 468 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TDRD5Q8NAT2 981 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PIWIL2Q8TC59 973 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 U2AF1L4Q8WU68 220 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 C1orf74Q96LT6 269 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 CPXM1Q96SM3 734 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PARVGQ9HBI0 331 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 AGPAT4Q9NRZ5 378 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 SEPT11Q9NVA2 429 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 ATAD3AQ9NVI7 634 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TNFRSF10DQ9UBN6 386 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 MORF4L1Q9UBU8 362 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 MID2Q9UJV3 735 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PCDHB4Q9Y5E5 795 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 KLF2Q9Y5W3 355 aaPredicted RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 A8MVJ9 347 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TTC34A8MYJ7 566 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 HACD1B0YJ81 288 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 ATP2A1O14983 1001 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PAPSS1O43252 624 aaPredicted RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 OPHN1O60890 802 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 STBD1O95210 358 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 MATN4O95460 622 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 OATP04181 439 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 CALB1P05937 261 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 ESRRAP11474 423 aaPredicted RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TNFAIP3P21580 790 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PCSK6P29122 969 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 COPAP53621 1224 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TRPC3Q13507 836 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 THOC5Q13769 683 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 ACOX1Q15067 660 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 HLFQ16534 295 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 MAP7D1Q3KQU3 841 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 SLC44A4Q53GD3 710 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 FAM47CQ5HY64 1035 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TCHHL1Q5QJ38 904 aaPredicted RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 XKRXQ6PP77 449 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 SETD6Q8TBK2 473 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TCP10LQ8TDR4 215 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TFB1MQ8WVM0 346 aaKnown RBP4.65□□□□□ -1.67
PTPN22-201ENST00000359785 IDI2Q9BXS1 227 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 LRRC4Q9HBW1 653 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 TBC1D23Q9NUY8 699 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 DCDC2Q9UHG0 476 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 STX8Q9UNK0 236 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 MAPK8IP1Q9UQF2 711 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 DTNAQ9Y4J8 743 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 PCDHA11Q9Y5I1 949 aa4.65□□□□□ -1.67
PTPN22-201ENST00000359785 NPIPB8E9PQR5 432 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 DTNBO60941 627 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 BBOX1O75936 387 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 PTTG1O95997 202 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 CCDC159P0C7I6 412 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 FCGR1AP12314 374 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ACTN1P12814 892 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 CD9P21926 228 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 PKLRP30613 574 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 RFC4P35249 363 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 IGHMBP2P38935 993 aaKnown RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 CD96P40200 585 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 CETN2P41208 172 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 MATR3P43243 847 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 MAGEA10P43363 369 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ZNF135P52742 658 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 EPS8Q12929 822 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 PCLAFQ15004 111 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 SUZ12Q15022 739 aaKnown RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 DUSP7Q16829 419 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 RAP1GAP2Q684P5 730 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 LETMD1Q6P1Q0 360 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 C16orf46Q6P387 395 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 SPOCD1Q6ZMY3 1216 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 C4orf19Q8IY42 314 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ABRAQ8N0Z2 381 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 CLEC4FQ8N1N0 589 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 MUL1Q969V5 352 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ALPK1Q96QP1 1244 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 FEM1AQ9BSK4 669 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 C1QTNF3Q9BXJ4 246 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ZNF275Q9NSD4 429 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 ARHGAP26Q9UNA1 814 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 LTBP3Q9NS15 1303 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 TEX51A0A1B0GUA7 166 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 TUBAL3A6NHL2 446 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 USP17L12C9JPN9 530 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 USP17L21D6R901 530 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 E5RJQ4 531 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 H3BMQ9 156 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 FOXN3O00409 490 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 MDM4O15151 490 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 PFDN6O15212 129 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 HNRNPRO43390 633 aaKnown RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 MYCP01106 439 aaPredicted RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 SNRPAP09012 282 aaKnown RBP4.64□□□□□ -1.67
PTPN22-201ENST00000359785 PRR35P0CG20 571 aa4.64□□□□□ -1.67
PTPN22-201ENST00000359785 RBP3P10745 1247 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms