RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 DLG1Q12959 904 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 SCARF1Q14162 830 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 GRTP1Q5TC63 336 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CYP4A22Q5TCH4 519 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 TMEM270Q6UE05 265 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 PIWIL4Q7Z3Z4 852 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ALYREFQ86V81 257 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 C4orf32Q8N8J7 132 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 LSM14AQ8ND56 463 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 SHC3Q92529 594 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CNDP2Q96KP4 475 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 EIF2AK1Q9BQI3 630 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ERVK-5Q9HDB9 667 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ASAP1Q9ULH1 1129 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 FAM237BA0A1B0GVD1 139 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 GUCY1B2O75343 617 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 DDHD2O94830 711 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 PROCP04070 461 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CD58P19256 250 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 GSSP48637 474 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 PPP6R3Q5H9R7 873 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ZFYVE19Q96K21 471 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 QKIQ96PU8 341 aaKnown RBP eCLIP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 RACGAP1Q9H0H5 632 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 RBBP6Q7Z6E9 1792 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 TRIM38O00635 465 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 AKAP3O75969 853 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CLPXO76031 633 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 GLRA2P23416 452 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ADAM17P78536 824 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 MVKQ03426 396 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 PHF13Q86YI8 300 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 OR7A2PQ8NGA2 310 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ALG3Q92685 438 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 VPS33AQ96AX1 596 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 SLITRK1Q96PX8 696 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 YME1L1Q96TA2 773 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CALN1Q9BXU9 219 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 KCNMB3Q9NPA1 279 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 AURKCQ9UQB9 309 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CLEC11AQ9Y240 323 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ITM2BQ9Y287 266 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ZNF536O15090 1300 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 FGFR2P21802 821 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ADGRE1Q14246 886 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 LUZP2Q86TE4 346 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CYP4X1Q8N118 509 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 TMA16Q96EY4 203 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 OR2B2Q9GZK3 357 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 NYAP2Q9P242 653 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 MKLN1Q9UL63 735 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 H7C0S8 307 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 DDX3YO15523 660 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 LIASO43766 372 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 SIN3BO75182 1162 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 POTEHQ6S545 545 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 AP3S1Q92572 193 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 C11orf70Q9BRQ4 267 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 C2orf40Q9H1Z8 148 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 COPS7BQ9H9Q2 264 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 WDR41Q9HAD4 459 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ANAPC2Q9UJX6 822 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 QARSP47897 775 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 FASTKD1Q53R41 847 aaKnown RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 TMC7Q7Z402 723 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 MAPKAPK5Q8IW41 473 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 ABRAQ8N0Z2 381 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CENPSQ8N2Z9 138 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CHCHD4Q8N4Q1 142 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 MCUQ8NE86 351 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 BHLHE22Q8NFJ8 381 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 SLC44A1Q8WWI5 657 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 HDAC11Q96DB2 347 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 PRICKLE1Q96MT3 831 aaPredicted RBP6.73□□□□□ -1.33
TRIM38-201ENST00000357085 VAT1Q99536 393 aa6.73□□□□□ -1.33
TRIM38-201ENST00000357085 CENPBD1B2RD01 187 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 GPIP06744 558 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 CHKAP35790 457 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 PTGIRP43119 386 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 XKR9Q5GH70 373 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 EARS2Q5JPH6 523 aaKnown RBP6.72□□□□□ -1.33
TRIM38-201ENST00000357085 FOXB2Q5VYV0 432 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 SPOCK2Q92563 424 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 RCOR3Q9P2K3 495 aaPredicted RBP6.72□□□□□ -1.33
TRIM38-201ENST00000357085 ERVK-11Q9UQG0 969 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 TMEM98Q9Y2Y6 226 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 PEX16Q9Y5Y5 336 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 TRIM13O60858 407 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 SUPT7LO94864 414 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 OXSR1O95747 527 aaPredicted RBP6.72□□□□□ -1.33
TRIM38-201ENST00000357085 ENO2P09104 434 aaPredicted RBP6.72□□□□□ -1.33
TRIM38-201ENST00000357085 CCND2P30279 289 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 GCLMP48507 274 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 SLC1A6P48664 564 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 MRPS22P82650 360 aaKnown RBP6.72□□□□□ -1.33
TRIM38-201ENST00000357085 SLC25A3Q00325 362 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 UBE2Q1Q7Z7E8 422 aa6.72□□□□□ -1.33
TRIM38-201ENST00000357085 SVOPLQ8N434 492 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms