RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 FAM217AQ8IXS0 508 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 CCDC112Q8NEF3 446 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 FNIP1Q8TF40 1166 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 RFFLQ8WZ73 363 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 BBS2Q9BXC9 721 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 LACRTQ9GZZ8 138 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 ARHGEF3Q9NR81 526 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 WNT16Q9UBV4 365 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 PCSK1NQ9UHG2 260 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 HS3ST4Q9Y661 456 aa18.53■□□□□ 0.56
PDLIM7-202ENST00000355841 SHISA7A6NL88 538 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 ADH1CP00326 375 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 MLF2Q15773 248 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 C12orf40Q86WS4 652 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 CHSY1Q86X52 802 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 LGI2Q8N0V4 545 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 CFAP52Q8N1V2 620 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 AZIN2Q96A70 460 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 PRICKLE1Q96MT3 831 aaPredicted RBP18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 EPHX3Q9H6B9 360 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 SALL4Q9UJQ4 1053 aa18.52■□□□□ 0.56
PDLIM7-202ENST00000355841 MYOFQ9NZM1 2061 aa18.52■□□□□ 0.55
PDLIM7-202ENST00000355841 SPECC1L-ADORA2AF8WAN1 911 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 ARHGAP6O43182 974 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 LRCH4O75427 683 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 RNF8O76064 485 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 LATS1O95835 1130 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 TYRP14679 529 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 TACR2P21452 398 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 CTHP32929 405 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 ADRA1BP35368 520 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 SLC6A11P48066 632 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 SIGLEC14Q08ET2 396 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 NR1H3Q13133 447 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 MESDQ14696 234 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 C14orf80Q86SX3 495 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 KIAA1328Q86T90 577 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 CPXM2Q8N436 756 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 DDI1Q8WTU0 396 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 PEBP4Q96S96 227 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 PRMT1Q99873 361 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 LUC7LQ9NQ29 371 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 IP6K2Q9UHH9 426 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 PAXBP1Q9Y5B6 917 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 COL4A2P08572 1712 aa18.51■□□□□ 0.55
PDLIM7-202ENST00000355841 PI4K2BG5E9Z4 385 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 GFRA2O00451 464 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 TRIM24O15164 1050 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 PDGFBP01127 241 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 ALADP13716 330 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 DESP17661 470 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 MIPP30301 263 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 NOP2P46087 812 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 VAV2P52735 878 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 MESP2Q0VG99 397 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 AUHQ13825 339 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 FYB2Q5VWT5 728 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 TRIM67Q6ZTA4 783 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 CIR1Q86X95 450 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 RHOT2Q8IXI1 618 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 TMA16Q96EY4 203 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 KCNF1Q9H3M0 494 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 FBRSL1Q9HCM7 1045 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 GPATCH2LQ9NWQ4 482 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 STIM2Q9P246 746 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 TRIM10Q9UDY6 481 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 VANGL2Q9ULK5 521 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 CLEC4EQ9ULY5 219 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 ADGRG1Q9Y653 693 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 IRAK1P51617 712 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 KRT83P78385 493 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 GAD2Q05329 585 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 FBXL22Q6P050 247 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 PYROXD2Q8N2H3 581 aa18.5■□□□□ 0.55
PDLIM7-202ENST00000355841 F5H5T6 163 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 FAM72CH0Y354 149 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 HOXC11O43248 304 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 BUB1O43683 1085 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 TBL1XO60907 577 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 SRGAP2O75044 1071 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 PENKP01210 267 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 CYBBP04839 570 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 IL1R2P27930 398 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 OPRD1P41143 372 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 SSR1P43307 286 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 MLLT6P55198 1093 aaPredicted RBP18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 PON2Q15165 354 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 ARL13BQ3SXY8 428 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 FAM72AQ5TYM5 149 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 TXNRD3NBQ6F5E7 133 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 FAM72DQ6L9T8 149 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 SLFN11Q7Z7L1 901 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 FAM72BQ86X60 149 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 NIPA2Q8N8Q9 360 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 IGSF8Q969P0 613 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 DDX50Q9BQ39 737 aaKnown RBP18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 FOXQ1Q9C009 403 aa18.49■□□□□ 0.55
PDLIM7-202ENST00000355841 GOLPH3Q9H4A6 298 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms