RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 NDRG1Q92597 394 aaKnown RBP22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 UTP4Q969X6 686 aaKnown RBP22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 C7orf26Q96N11 449 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 SLC13A1Q9BZW2 595 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 EBF2Q9HAK2 575 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 KCNK13Q9HB14 408 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 MFHAS1Q9Y4C4 1052 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 RNF103O00237 685 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 BIRC5O15392 142 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 UGT1A9O60656 530 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 RGS2P41220 211 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 TKTL1P51854 596 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 DBN1Q16643 649 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 MARK2Q7KZI7 788 aaKnown RBP22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 ACMSDQ8TDX5 336 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 NTAN1Q96AB6 310 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 E2F7Q96AV8 911 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 TBC1D10AQ9BXI6 508 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 TSPYL2Q9H2G4 693 aaPredicted RBP22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 UGT1A7Q9HAW7 530 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 UGT1A10Q9HAW8 530 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 UGT1A8Q9HAW9 530 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 SIRPGQ9P1W8 387 aa22.93■■□□□ 1.26
NKX2-1-201ENST00000354822 EEF2KO00418 725 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 BEST1O76090 585 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 CYP2B6P20813 491 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 ZBTB16Q05516 673 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 MDH1BQ5I0G3 518 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 NDUFAF2Q8N183 169 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 TMEM120AQ9BXJ8 343 aa22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 NOP53Q9NZM5 478 aaKnown RBP22.92■■□□□ 1.26
NKX2-1-201ENST00000354822 CAPN9O14815 690 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CREB3O43889 395 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 HAUS5O94927 633 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CBX6O95503 412 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 PGAM1P18669 254 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 ACAT1P24752 427 aaKnown RBP22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 NDUFV1P49821 464 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CDK18Q07002 472 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 BMPR2Q13873 1038 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 DPYSQ14117 519 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 MROH9Q5TGP6 573 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CASC4Q6P4E1 433 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 RFX8Q6ZV50 586 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 NUDCD3Q8IVD9 361 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 PDCD7Q8N8D1 485 aaKnown RBP22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CCNYQ8ND76 341 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 ARMC2Q8NEN0 867 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 TLE6Q9H808 572 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 DDX43Q9NXZ2 648 aaKnown RBP22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 IGSF9Q9P2J2 1179 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 WDR27A2RRH5 827 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 HMX2A2RU54 273 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 A8MUI8 341 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 C9IYK1 514 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 M0QZ92 97 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 ADRA1BP35368 520 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 MAP3K7CLP57077 242 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 GJA9P57773 515 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 BEX3Q00994 111 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 NME3Q13232 169 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 KYAT3Q6YP21 454 aaKnown RBP22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 SKA1Q96BD8 255 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 SENP8Q96LD8 212 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 CNGB3Q9NQW8 809 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 KCNK4Q9NYG8 393 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 RRN3Q9NYV6 651 aa22.91■■□□□ 1.26
NKX2-1-201ENST00000354822 NCAM2O15394 837 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 CCDC22O60826 627 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 HCAR3P49019 387 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 TMPRSS15P98073 1019 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 SCAPQ12770 1279 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 IFRD2Q12894 506 aaPredicted RBP22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 KRT72Q14CN4 511 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 FSCN1Q16658 493 aaKnown RBP22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 SYPL2Q5VXT5 272 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 LONP2Q86WA8 852 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 NSL1Q96IY1 281 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 PRDM12Q9H4Q4 367 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 TRIP12Q14669 1992 aaPredicted RBP22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 SYNJ2BP-COX16A0A087WUM0 186 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 DCLK1O15075 740 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 PITX1P78337 314 aaPredicted RBP22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 IFNL1Q8IU54 200 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 SOCS4Q8WXH5 440 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 APBA2Q99767 749 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 BRD8Q9H0E9 1235 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 NMRK2Q9NPI5 230 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 KRT82Q9NSB4 513 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 PIGVQ9NUD9 493 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 PCMTD2Q9NV79 361 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 COX16Q9P0S2 106 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 MCM8Q9UJA3 840 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 L3MBTL1Q9Y468 752 aa22.9■■□□□ 1.26
NKX2-1-201ENST00000354822 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 KPNA6O60684 536 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 ANP32DO95626 131 aa22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 ZNF135P52742 658 aaPredicted RBP22.89■■□□□ 1.26
NKX2-1-201ENST00000354822 DAOAP59103 153 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms