RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 CCNJLQ8IV13 435 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 SLC15A3Q8IY34 581 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ARHGAP24Q8N264 748 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 FBXL16Q8N461 479 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 CCNYQ8ND76 341 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 OR13H1Q8NG92 308 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 KRT12Q99456 494 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 INTS7Q9NVH2 962 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 INTS6Q9UL03 887 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 NFU1Q9UMS0 254 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 COLEC10Q9Y6Z7 277 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 MAST3O60307 1309 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 CHD2O14647 1828 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 CLTCQ00610 1675 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 THBDP07204 575 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 DRD2P14416 443 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 PAX7P23759 505 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 DNASE1P24855 282 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ADH6P28332 368 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 SLC16A2P36021 539 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 AFF1P51825 1210 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 ZNF135P52742 658 aaPredicted RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 RPS18P62269 152 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 FAM69CQ0P6D2 419 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 SUZ12Q15022 739 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 ARL13AQ5H913 290 aaPredicted RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 FGD3Q5JSP0 725 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 HYIQ5T013 277 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ZNF529Q6P280 563 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 NPNTQ6UXI9 565 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ISLR2Q6UXK2 745 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 CATSPER4Q7RTX7 472 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 DPP9Q86TI2 863 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 TMEM139Q8IV31 216 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 NRSN1Q8IZ57 195 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 FAM9CQ8IZT9 166 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 IL17REQ8NFR9 667 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 CNOT9Q92600 299 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 SHDQ96IW2 340 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 VCPIP1Q96JH7 1222 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 YIPF3Q9GZM5 350 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 INTS9Q9NV88 658 aaKnown RBP6.15□□□□□ -1.42
RFC1-201ENST00000349703 MYOTQ9UBF9 498 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 LRWD1Q9UFC0 647 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ANKARQ7Z5J8 1434 aa6.15□□□□□ -1.42
RFC1-201ENST00000349703 ARHGAP10A1A4S6 786 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 CCDC188H7C350 402 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 EYA2O00167 538 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 HS3ST1O14792 307 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 GPAA1O43292 621 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 RHOBTB3O94955 611 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 GYPCP04921 128 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 SNRPA1P09661 255 aaKnown RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 BMP3P12645 472 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 IL7RP16871 459 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 TPP2P29144 1249 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 PPP2R2BQ00005 443 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ITIH4Q14624 930 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ZYXQ15942 572 aaKnown RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 ZACNQ401N2 412 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 C10orf76Q5T2E6 689 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 DPY19L4Q7Z388 723 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 C16orf62Q7Z3J2 963 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 TICAM1Q8IUC6 712 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 GRK7Q8WTQ7 553 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ASIC4Q96FT7 647 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ZIM3Q96PE6 472 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 SEMA3CQ99985 751 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 AGXT2Q9BYV1 514 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 UNKQ9C0B0 810 aaKnown RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 PRDM8Q9NQV8 689 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 KDM6AO15550 1401 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 NPHP4O75161 1426 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 EME2A4GXA9 379 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 H0Y3Z8 333 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 SH2B2O14492 632 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 RNMTO43148 476 aaKnown RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 PENKP01210 267 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 ATF7P17544 494 aaPredicted RBP6.15□□□□□ -1.43
RFC1-201ENST00000349703 HK1P19367 917 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 CD247P20963 164 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 PMS2P11Q13670 270 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 DSC3Q14574 896 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 TM4SF20Q53R12 229 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 NT5DC1Q5TFE4 455 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ERICH5Q6P6B1 374 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 FGD2Q7Z6J4 655 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 EGFL6Q8IUX8 553 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 SPATA18Q8TC71 538 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 LRRC20Q8TCA0 184 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 TUBGCP2Q9BSJ2 902 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 COG4Q9H9E3 785 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 OVOS2A0A0G2JMS6 1433 aa6.15□□□□□ -1.43
RFC1-201ENST00000349703 ALKQ9UM73 1620 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 RSPH10B2B2RC85 870 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 FSCN2O14926 492 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 RASA4O43374 803 aa6.14□□□□□ -1.43
RFC1-201ENST00000349703 AKAP8O43823 692 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms