RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 AXLP30530 894 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 SATB1Q01826 763 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 TMEM109Q9BVC6 243 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 TKTL2Q9H0I9 626 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 ZNF395Q9H8N7 513 aaPredicted RBP14.33□□□□□ -0.11
TRIM4-201ENST00000349062 TMLHEQ9NVH6 421 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 HCSTQ9UBK5 93 aa14.33□□□□□ -0.11
TRIM4-201ENST00000349062 SNX3O60493 162 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ACAP1Q15027 740 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 NCBP2-AS2Q69YL0 99 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 LRRC6Q86X45 466 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 CDKL3Q8IVW4 592 aaPredicted RBP14.33□□□□□ -0.12
TRIM4-201ENST00000349062 MTMR10Q9NXD2 777 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 PHTF1Q9UMS5 762 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 DERAQ9Y315 318 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 EME2A4GXA9 379 aaPredicted RBP14.33□□□□□ -0.12
TRIM4-201ENST00000349062 XPO1O14980 1071 aaKnown RBP14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ERCC2P18074 760 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 TAC1P20366 129 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ANKRD20A2Q5SQ80 823 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ANKRD20A1Q5TYW2 823 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ANKRD20A3Q5VUR7 823 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 C16orf46Q6P387 395 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ZCCHC23Q6ZST2 131 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 ARMC2Q8NEN0 867 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 P2RY11Q96G91 374 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 DNAI2Q9GZS0 605 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 WDCPQ9H6R7 721 aa14.33□□□□□ -0.12
TRIM4-201ENST00000349062 MDM4O15151 490 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 KCNE1P15382 129 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 ACADSBP45954 432 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 NCALDP61601 193 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 DDR2Q16832 855 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 SLC25A52Q3SY17 297 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 SLC45A4Q5BKX6 768 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 ARHGAP17Q68EM7 881 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
TRIM4-201ENST00000349062 BGNP21810 368 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 EML3Q32P44 896 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 CEP128Q6ZU80 1094 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 CAND1Q86VP6 1230 aaKnown RBP14.32□□□□□ -0.12
TRIM4-201ENST00000349062 METTL23Q86XA0 190 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF280BQ86YH2 543 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 PPP1R14CQ8TAE6 165 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 AGR3Q8TD06 166 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 TMEM237Q96Q45 408 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 POPDC2Q9HBU9 364 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 SIP14410 1827 aa14.32□□□□□ -0.12
TRIM4-201ENST00000349062 GPR182O15218 404 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 GPR15P49685 360 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PGFP49763 221 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 GATMP50440 423 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 KLHL38Q2WGJ6 581 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 THEMIS2Q5TEJ8 643 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 OVOS1Q6IE37 1185 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 TLDC1Q6P9B6 456 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 HNRNPABQ99729 332 aaKnown RBP14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PPP1R12CQ9BZL4 782 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 H3BRJ5 948 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 COPEO14579 308 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PPP1R12AO14974 1030 aaPredicted RBP14.31□□□□□ -0.12
TRIM4-201ENST00000349062 JCHAINP01591 159 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 LTFP02788 710 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ERVK-10P10266 1014 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ITGA7Q13683 1181 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 MIB1Q86YT6 1006 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ZMIZ2Q8NF64 920 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 OR52K1Q8NGK4 314 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ERP27Q96DN0 273 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 HSFY1Q96LI6 401 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF570Q96NI8 536 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ZNF670Q9BS34 389 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 ACSS3Q9H6R3 686 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 GDAP2Q9NXN4 497 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 KIAA0100Q14667 2235 aaKnown RBP14.31□□□□□ -0.12
TRIM4-201ENST00000349062 CSH1P0DML2 217 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 CSH2P0DML3 217 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 TGM2P21980 687 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 GRK4P32298 578 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 NOS2P35228 1153 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PTPN7P35236 360 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 SLC39A12Q504Y0 691 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 FAM117BQ6P1L5 589 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 UNC5AQ6ZN44 842 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 TFAP2DQ7Z6R9 452 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 PIGWQ7Z7B1 504 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 CD99L2Q8TCZ2 262 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 RAET1EQ8TD07 263 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 AZIN2Q96A70 460 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 SMYD2Q9NRG4 433 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 TXNDC16Q9P2K2 825 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
TRIM4-201ENST00000349062 SRRM3A6NNA2 597 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms