RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 CYS1Q717R9 158 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 TMEM173Q86WV6 379 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 CCNJLQ8IV13 435 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZDHHC14Q8IZN3 488 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GOLGA6L1Q8N7Z2 621 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GCNAQ96QF7 691 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 PNKPQ96T60 521 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZBED2Q9BTP6 218 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 KLF16Q9BXK1 252 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 MED4Q9NPJ6 270 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.41□□□□□ -1.229e-7■■□□□ 12.8
NUP43-201ENST00000340413 DENND4AQ7Z401 1863 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GOLGA6CA6NDK9 693 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GOLGA6BA6NDN3 693 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZNF197O14709 1029 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 XYLBO75191 536 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GLUD1P00367 558 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GOLGA6DP0CG33 693 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 SRGAP2BP0DMP2 458 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 POU3F3P20264 500 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 IVDP26440 423 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 SSTR3P32745 418 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 SSR1P43307 286 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 CLCN4P51793 760 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CLCN6P51797 869 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 TPI1P60174 286 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 VSNL1P62760 191 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 MGAT5BQ3V5L5 792 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 SYPL2Q5VXT5 272 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 LRRC31Q6UY01 552 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CEP57Q86XR8 500 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 SCN4BQ8IWT1 228 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZCCHC9Q8N567 271 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 RTL3Q8N8U3 475 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 LRRN4CLQ8ND94 238 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 MAML1Q92585 1016 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GOLGA6AQ9NYA3 693 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GRHL1Q9NZI5 618 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CWC15Q9P013 229 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 GMIPQ9P107 970 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CACNG4Q9UBN1 327 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 FARP1Q9Y4F1 1045 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 DOCK4Q8N1I0 1966 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 E7ESA3 106 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 F8W810 466 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 GJB6O95452 261 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 NUDT17P0C025 328 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ECHS1P30084 290 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 EIF3EP60228 445 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 OTUD4Q01804 1114 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 GUCY2DQ02846 1103 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 SLC12A1Q13621 1099 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 E2F5Q15329 346 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 TAF5Q15542 800 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ANO4Q32M45 955 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 RABGAP1LQ5R372 815 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 ITPRIPL1Q6GPH6 555 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 FBXO38Q6PIJ6 1188 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 TMC8Q8IU68 726 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 PPIL6Q8IXY8 311 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 CCDC185Q8N715 623 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 KLHL23Q8NBE8 558 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 HSPH1Q92598 858 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 DPF3Q92784 378 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 E2F7Q96AV8 911 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 RNF25Q96BH1 459 aaPredicted RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 GDF15Q99988 308 aa7.41□□□□□ -1.22
NUP43-201ENST00000340413 DDX47Q9H0S4 455 aaKnown RBP7.41□□□□□ -1.22
NUP43-201ENST00000340413 ZBBXA8MT70 800 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SEC31AO94979 1220 aaKnown RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 KRT14P02533 472 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 CTNNB1P35222 781 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SLC11A2P49281 568 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 PPP1R7Q15435 360 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 C2CD6Q53TS8 623 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 PRSS55Q6UWB4 352 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 HFE2Q6ZVN8 426 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SETD3Q86TU7 594 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 NLRP14Q86W24 1093 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 RIBC1Q8N443 379 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 ACTL9Q8TC94 416 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TFB1MQ8WVM0 346 aaKnown RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 AP1M1Q9BXS5 423 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ROPN1BQ9BZX4 212 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 DHX35Q9H5Z1 703 aaKnown RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 ROPN1Q9HAT0 212 aaPredicted RBP7.4□□□□□ -1.22
NUP43-201ENST00000340413 NMUR1Q9HB89 426 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 EPB41L5Q9HCM4 733 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 MARCH2Q9P0N8 246 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 A6NNZ2 444 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TEX28O15482 410 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 TTI1O43156 1089 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 FAM155BO75949 473 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 UPP2O95045 317 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 SEC24AO95486 1093 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 CXCL14O95715 111 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 LRG1P02750 347 aa7.4□□□□□ -1.22
NUP43-201ENST00000340413 ACRP10323 421 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms