RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 F5H5T6 163 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 NDUFS3O75489 264 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 STMN1P16949 149 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TBX4P57082 545 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DRICH1Q6PGQ1 229 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 LRRN4Q8WUT4 740 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ULK4Q96C45 1275 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TWNKQ96RR1 684 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 EGFL8Q99944 293 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 KDM4CQ9H3R0 1056 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ACSS3Q9H6R3 686 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CNGB3Q9NQW8 809 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 KIF1CO43896 1103 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 EDNRBP24530 442 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CRADDP78560 199 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 EFTUD2Q15029 972 aaKnown RBP eCLIP6.46□□□□□ -1.383e-6■■□□□ 13.9
PRKDC-202ENST00000338368 RASA2Q15283 850 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CYP1B1Q16678 543 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 FAM35AQ86V20 835 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 STK32AQ8WU08 396 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 MCRS1Q96EZ8 462 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 FBXO44Q9H4M3 255 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CHST12Q9NRB3 414 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 GGA2Q9UJY4 613 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 KLHL2O95198 593 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 HSPA8P11142 646 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DRD4P21917 467 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 LILRA4P59901 499 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 MAPRE2Q15555 327 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TXNRD3NBQ6F5E7 133 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CES3Q6UWW8 571 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TOP6BLQ8N6T0 577 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 NETO2Q8NC67 525 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DNAJC16Q9Y2G8 782 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TUBP50607 506 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 PDPK2PQ6A1A2 396 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 MIPOL1Q8TD10 442 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM120AQ9BXJ8 343 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SHCBP1LQ9BZQ2 653 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DPEP3Q9H4B8 488 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 NT5MQ9NPB1 228 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 IGKV6D-21A0A0A0MT36 114 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 APOA4P06727 396 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SP3Q02447 781 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ZNF177Q13360 481 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SPANXN3Q5MJ09 141 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 PMF1Q6P1K2 205 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 NFKBIZQ9BYH8 718 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TRPC7Q9HCX4 862 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TLR8Q9NR97 1041 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM51Q9NW97 253 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ADA2Q9NZK5 511 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 FAM8A1Q9UBU6 413 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 TSR3Q9UJK0 312 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 MDM4O15151 490 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 PAPSS1O43252 624 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 NFKB1P19838 968 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CYP2C18P33260 490 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 GBE1Q04446 702 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 RGS9BPQ6ZS82 235 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 HOMEZQ8IX15 550 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ILKAPQ9H0C8 392 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SLX4Q8IY92 1834 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 C10orf71Q711Q0 1435 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ERI2A8K979 691 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DUSP11O75319 330 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 AVILO75366 819 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CCND1P24385 295 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 BIRC2Q13490 618 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SOWAHAQ2M3V2 549 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 RNASEH2BQ5TBB1 312 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 ZCCHC23Q6ZST2 131 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 DDX1Q92499 740 aaKnown RBP6.46□□□□□ -1.38
PRKDC-202ENST00000338368 FAM53CQ9NYF3 392 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 MORF4L1Q9UBU8 362 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
PRKDC-202ENST00000338368 CYP3A5P20815 502 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MTFR1Q15390 333 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 HABP4Q5JVS0 413 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 NPLOC4Q8TAT6 608 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PDLIM7Q9NR12 457 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 RAMP2O60895 175 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SUPT7LO94864 414 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ALADP13716 330 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 LMO2P25791 158 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 RPL9P32969 192 aaKnown RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 POU6F1Q14863 301 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 NOMO2Q5JPE7 1267 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 N4BP2L1Q5TBK1 243 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PLD5Q8N7P1 536 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 SNX27Q96L92 541 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 ZFP42Q96MM3 310 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 MYCBPQ99417 103 aaPredicted RBP6.45□□□□□ -1.38
PRKDC-202ENST00000338368 GPR88Q9GZN0 384 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 PGAM1P18669 254 aa6.45□□□□□ -1.38
PRKDC-202ENST00000338368 GCKP35557 465 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms