RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GAS2O43903 313 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 HBP1O60381 514 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 GSTA2P09210 222 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 DHRS4L1P0CG22 281 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TNFAIP2Q03169 654 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC10A6Q3KNW5 377 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 KCTD21Q4G0X4 260 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 RIPOR1Q6ZS17 1223 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 XAB2Q9HCS7 855 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 USP1O94782 785 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TFE3P19532 575 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TYK2P29597 1187 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 SERPINB6P35237 376 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 AP2B1P63010 937 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 MRPS5P82675 430 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 MBTD1Q05BQ5 628 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 CCDC92Q53HC0 331 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 N4BP2L1Q5TBK1 243 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 FAM131BQ86XD5 332 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 PQLC3Q8N755 202 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 EBNA1BP2Q99848 306 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 NRDE2Q9H7Z3 1164 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 TLE6Q9H808 572 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 CYP3A43Q9HB55 503 aa17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 RPL26L1Q9UNX3 145 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-201ENST00000335793 ABLIM1O14639 778 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 TRDMT1O14717 391 aaKnown RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 RFPL1O75677 317 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 ARL4AP40617 200 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 KRT72Q14CN4 511 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 IZUMO2Q6UXV1 221 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 NCCRP1Q6ZVX7 275 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 EFCAB3Q8N7B9 438 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 PPP1R13LQ8WUF5 828 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 PPP1R36Q96LQ0 422 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 NFKBIEO00221 500 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 C6orf222P0C671 652 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 ARF4P18085 180 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 TGM2P21980 687 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 VGLL4Q14135 290 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 MAP7Q14244 749 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 SULF1Q8IWU6 871 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZBTB8BQ8NAP8 495 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 NR1H4Q96RI1 486 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 LGMNQ99538 433 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 FRMD8Q9BZ67 464 aaPredicted RBP17■□□□□ 0.31
CDC42EP4-201ENST00000335793 ELP3Q9H9T3 547 aa17■□□□□ 0.31
CDC42EP4-201ENST00000335793 DNAJC6O75061 913 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 E2F6O75461 281 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ITGA2BP08514 1039 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 MLH1P40692 756 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 HIC1Q14526 733 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ULK2Q8IYT8 1036 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 CLEC4CQ8WTT0 213 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 FERMT1Q9BQL6 677 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 FAM49AQ9H0Q0 323 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 IFT122Q9HBG6 1241 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 STX18Q9P2W9 335 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 AP4E1Q9UPM8 1137 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 BPGMP07738 259 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 COG7P83436 770 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 SLC6A3Q01959 620 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 TAZQ16635 292 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 SPDYAQ5MJ70 313 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 RIOX2Q8IUF8 465 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 USP6NLQ92738 828 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 PGBD4Q96DM1 585 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 C20orf27Q9GZN8 174 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 UBAP1Q9NZ09 502 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 A0A0J9YVX5 310 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 PDE5AO76074 875 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 LYNP07948 512 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 F7P08709 466 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 CYP3A5P20815 502 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 IL4RP24394 825 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 GMPRP36959 345 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 CCR3P51677 355 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ADARP55265 1226 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 DPY19L2Q6NUT2 758 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 GSTCDQ8NEC7 633 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 PYDC1Q8WXC3 89 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZNF184Q99676 751 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 MRPL45Q9BRJ2 306 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 THAP1Q9NVV9 213 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ERAP1Q9NZ08 941 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ZNF112Q9UJU3 913 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 HES2Q9Y543 173 aa16.99■□□□□ 0.31
CDC42EP4-201ENST00000335793 ATICP31939 592 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 ABCG1P45844 678 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 DNAL1Q4LDG9 190 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 LCLAT1Q6UWP7 414 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 DNAAF3Q8N9W5 541 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 LENG1Q96BZ8 264 aaPredicted RBP16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 C7orf26Q96N11 449 aa16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 HBS1LQ9Y450 684 aaKnown RBP16.98■□□□□ 0.31
CDC42EP4-201ENST00000335793 DYTNA2CJ06 578 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms