RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PPP6R3Q5H9R7 873 aaPredicted RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 ATAT1Q5SQI0 421 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 CES5AQ6NT32 575 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 SPOCD1Q6ZMY3 1216 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 GET4Q7L5D6 327 aaPredicted RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 CREG2Q8IUH2 290 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 SMRP1Q8NCR6 262 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 FGF13Q92913 245 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 RBM41Q96IZ5 413 aaKnown RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 BTN2A3PQ96KV6 586 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 OSBPL2Q9H1P3 480 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 UBE2ZQ9H832 354 aaPredicted RBP22.28■■□□□ 1.16
TPM1-204ENST00000334895 SMARCAL1Q9NZC9 954 aa22.28■■□□□ 1.16
TPM1-204ENST00000334895 DOCK8Q8NF50 2099 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 CEP104O60308 925 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 CORO1AP31146 461 aaKnown RBP22.27■■□□□ 1.16
TPM1-204ENST00000334895 AVPR1AP37288 418 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 KRT81Q14533 505 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 NADSYN1Q6IA69 706 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 CCDC50Q8IVM0 306 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 UNC45BQ8IWX7 931 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 RASGEF1CQ8N431 466 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 ATP6V0D2Q8N8Y2 350 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 HLA-CQ95604 372 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 ZMYM5Q9UJ78 669 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 C5orf42Q9H799 3197 aa22.27■■□□□ 1.16
TPM1-204ENST00000334895 SCAMP3O14828 347 aaKnown RBP22.26■■□□□ 1.15
TPM1-204ENST00000334895 KCNA5P22460 613 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 PDK2Q15119 407 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 MS4A13Q5J8X5 152 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 Q6ZNB5 142 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 C14orf80Q86SX3 495 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 DENND1CQ8IV53 801 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 ZSCAN18Q8TBC5 510 aaPredicted RBP22.26■■□□□ 1.15
TPM1-204ENST00000334895 CAPZA3Q96KX2 299 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 PRMT1Q99873 361 aaKnown RBP22.26■■□□□ 1.15
TPM1-204ENST00000334895 CALN1Q9BXU9 219 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 SIK2Q9H0K1 926 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 CWC15Q9P013 229 aaKnown RBP22.26■■□□□ 1.15
TPM1-204ENST00000334895 CFAP97Q9P2B7 532 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 OR12D3Q9UGF7 316 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 CDC23Q9UJX2 597 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 NEU3Q9UQ49 428 aa22.26■■□□□ 1.15
TPM1-204ENST00000334895 TCF20Q9UGU0 1960 aaKnown RBP22.26■■□□□ 1.15
TPM1-204ENST00000334895 hCG_1818297A0A087WSY0 165 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 H3BQ06 376 aaPredicted RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 LEFTY2O00292 366 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 PDE2AO00408 941 aaPredicted RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 KRT10P13645 584 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 GOT1P17174 413 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 HARS2P49590 506 aaKnown RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 MLLT6P55198 1093 aaPredicted RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 TFF2Q03403 129 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 ADCY2Q08462 1091 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 MANEALQ5VSG8 457 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 ARID3BQ8IVW6 561 aaPredicted RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 ZNF683Q8IZ20 524 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 SH3RF2Q8TEC5 729 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 FAF2Q96CS3 445 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 C1orf74Q96LT6 269 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 RIPOR3Q96MK2 946 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 ZNF670Q9BS34 389 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 POMKQ9H5K3 350 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 TDP1Q9NUW8 608 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 AGO1Q9UL18 857 aaKnown RBP22.25■■□□□ 1.15
TPM1-204ENST00000334895 MRFAP1Q9Y605 127 aa22.25■■□□□ 1.15
TPM1-204ENST00000334895 GOLGA6L7A0A1B0GV03 622 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 ACSL4O60488 711 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 LRIG2O94898 1065 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 WEE1P30291 646 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 PTPN7P35236 360 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 COPS2P61201 443 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 PPP2R5EQ16537 467 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 FAM133BQ5BKY9 247 aaKnown RBP22.24■■□□□ 1.15
TPM1-204ENST00000334895 SEL1L2Q5TEA6 688 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 SUSD6Q92537 303 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 AZIN2Q96A70 460 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 CSPG4P5Q96PW8 444 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 OSBPL8Q9BZF1 889 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 SLC12A6Q9UHW9 1150 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 CD207Q9UJ71 328 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 TTC7AQ9ULT0 858 aaPredicted RBP22.24■■□□□ 1.15
TPM1-204ENST00000334895 TCRBV7S2A1N4TA0A589 114 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 CREB3O43889 395 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 SLC6A4P31645 630 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 MTHFRP42898 656 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 NRG1Q02297 640 aaPredicted RBP22.24■■□□□ 1.15
TPM1-204ENST00000334895 ODF2Q5BJF6 829 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 TFDP3Q5H9I0 405 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 FAM78AQ5JUQ0 283 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 RAP1GAP2Q684P5 730 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 VSIG1Q86XK7 387 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 MAP7D3Q8IWC1 876 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 ZDHHC14Q8IZN3 488 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 PCDH19Q8TAB3 1148 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 ACTRT1Q8TDG2 376 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 RSPRY1Q96DX4 576 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 MYEOVQ96EZ4 313 aa22.24■■□□□ 1.15
TPM1-204ENST00000334895 MYADMQ96S97 322 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms