RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 CNTNAP3BQ96NU0 1288 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 CNTNAP3Q9BZ76 1288 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 ULBP1Q9BZM6 244 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 CEP44Q9C0F1 390 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 GGA2Q9UJY4 613 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 TBC1D30Q9Y2I9 924 aa6.65□□□□□ -1.35
USP16-201ENST00000334352 MAGEC1O60732 1142 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 TRIM49P0CI25 452 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 TRIM49CP0CI26 452 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 GOT1P17174 413 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 TIE1P35590 1138 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 CTSKP43235 329 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 SLC20A2Q08357 652 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 ZNF234Q14588 700 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 SUZ12Q15022 739 aaKnown RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 TEAD4Q15561 434 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 HNRNPA1L2Q32P51 320 aaKnown RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 EFHC1Q5JVL4 640 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 ZNF776Q68DI1 518 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 KIAA0895LQ68EN5 471 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 CCDC117Q8IWD4 279 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 TMIEQ8NEW7 156 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 ERCC4Q92889 916 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 NAA15Q9BXJ9 866 aaKnown RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 B3GNT4Q9C0J1 378 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 PLCB1Q9NQ66 1216 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.64□□□□□ -1.35
USP16-201ENST00000334352 NAGPAQ9UK23 515 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 OR51B4Q9Y5P0 310 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 AP1G1O43747 822 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 PABPC1P11940 636 aaKnown RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 C5AR1P21730 350 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 ADORA2BP29275 332 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 GBP1P32455 592 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 MLLT3P42568 568 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 KDSRQ06136 332 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 FUT11Q495W5 492 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 TMEM215Q68D42 235 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 FAM114A1Q8IWE2 563 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 PRCCQ92733 491 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 ISG20Q96AZ6 181 aaKnown RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 ALG14Q96F25 216 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 LENG8Q96PV6 779 aaPredicted RBP6.64□□□□□ -1.35
USP16-201ENST00000334352 ZSWIM1Q9BR11 485 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 PREBQ9HCU5 417 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 CACNA2D2Q9NY47 1150 aa6.64□□□□□ -1.35
USP16-201ENST00000334352 A0A1W2PR77 199 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 NEDD8-MDP1E9PL57 170 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 IL12RB1P42701 662 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TPMTP51580 245 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 AIF1P55008 147 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 BNC1Q01954 994 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ZNF33AQ06730 810 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 MESP2Q0VG99 397 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TMCO4Q5TGY1 634 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SLC26A9Q7LBE3 791 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SCUBE3Q8IX30 993 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TTC8Q8TAM2 541 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SPOCK2Q92563 424 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TSC1Q92574 1164 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 ADAM33Q9BZ11 813 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 INTS2Q9H0H0 1204 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 POPDC2Q9HBU9 364 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 LRRC4Q9HBW1 653 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PRSS16Q9NQE7 514 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PCOLCE2Q9UKZ9 415 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SSUH2Q9Y2M2 353 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PAXBP1Q9Y5B6 917 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SLC12A8A0AV02 714 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 CFAP69A5D8W1 941 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 C4orf47A7E2U8 309 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 EIF3CLB5ME19 914 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 HSF2BPO75031 334 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 F9P00740 461 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 BMP6P22004 513 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TBX4P57082 545 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 PAK1Q13153 545 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 AGERQ15109 404 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TRIM61Q5EBN2 209 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 NADSYN1Q6IA69 706 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SCARA5Q6ZMJ2 495 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 SETD3Q86TU7 594 aaPredicted RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 MIB1Q86YT6 1006 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 NAXDQ8IW45 347 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 RAVER1Q8IY67 606 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 OR2T34Q8NGX1 318 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 RNF139Q8WU17 664 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 CASKIN2Q8WXE0 1202 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 TFAP2BQ92481 460 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 WBP1Q96G27 269 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 FAM84AQ96KN4 292 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 KREMEN1Q96MU8 473 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 HAPLN3Q96S86 360 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 EIF3CQ99613 913 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 HDAC8Q9BY41 377 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 RASAL2Q9UJF2 1139 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 APOBEC2Q9Y235 224 aaKnown RBP6.63□□□□□ -1.35
USP16-201ENST00000334352 DCDC2BA2VCK2 349 aa6.63□□□□□ -1.35
USP16-201ENST00000334352 KCNJ18B7U540 433 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms