RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TNFSF9P41273 254 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 GABRB2P47870 512 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PPIDQ08752 370 aaKnown RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FLOT2Q14254 428 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 EMC2Q15006 297 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PPP6R3Q5H9R7 873 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 MBLAC2Q68D91 279 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 KBTBD6Q86V97 674 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 RNPEPQ9H4A4 650 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 ASNSD1Q9NWL6 643 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FAF1Q9UNN5 650 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 AK5Q9Y6K8 562 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PEX1O43933 1283 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CCDC166P0CW27 439 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CDK4P11802 303 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 RAP1GAPP47736 663 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 SNAPC2Q13487 334 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 MARVELD2Q8N4S9 558 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 TRIML2Q8N7C3 387 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 SERPINI1Q99574 410 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FRMD8Q9BZ67 464 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PIH1D1Q9NWS0 290 aaKnown RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 C6orf203Q9P0P8 240 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 BTBD7Q9P203 1132 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 H3BNX3 289 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 H3BSA7 217 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 TPP1O14773 563 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FAM58BPP0C7Q3 252 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 FGF3P11487 239 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 OSTNP61366 133 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CRADDP78560 199 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 ACAP1Q15027 740 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 OGFRL1Q5TC84 451 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CCDC60Q8IWA6 550 aaPredicted RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 MRPS26Q9BYN8 205 aaKnown RBP14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CYTH4Q9UIA0 394 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 DMTF1Q9Y222 760 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 CNTNAP2Q9UHC6 1331 aa14.12□□□□□ -0.15
SYNE3-201ENST00000334258 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GOLGA8QA0A0J9YX86 632 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GOLGA8OA6NCC3 632 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GOLGA8NF8WBI6 632 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 HSPA4LO95757 839 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 C1QAP02745 245 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 RALBP11234 206 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 SERPINB8P50452 374 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 CBX3Q13185 183 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 FAM47CQ5HY64 1035 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 TRIM67Q6ZTA4 783 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 LZICQ8WZA0 190 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 CDRT15Q96T59 188 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 EBNA1BP2Q99848 306 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GNEQ9Y223 722 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 POLR2AP24928 1970 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 NEMP1O14524 444 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GLRA3O75311 464 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 TRMUO75648 421 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 HMGCRP04035 888 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 ERBB2P04626 1255 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 PIM1P11309 404 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 PDGFRAP16234 1089 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 PCSK6P29122 969 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 TYK2P29597 1187 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GRIA1P42261 906 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 MTTPP55157 894 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 PKNOX1P55347 436 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 C15orf59Q2T9L4 293 aaPredicted RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 MAVSQ7Z434 540 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 FAM96AQ9H5X1 160 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 STN1Q9H668 368 aaKnown RBP14.11□□□□□ -0.15
SYNE3-201ENST00000334258 GPRC5DQ9NZD1 345 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 THEGQ9P2T0 379 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 CIDEBQ9UHD4 219 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 SSX2IPQ9Y2D8 614 aa14.11□□□□□ -0.15
SYNE3-201ENST00000334258 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 MAGEB3O15480 346 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 DENRO43583 198 aaKnown RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TBC1D12O60347 775 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PLIN3O60664 434 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 YBX3P16989 372 aaKnown RBP eCLIP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 GMPRP36959 345 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 CDH8P55286 799 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 BAATQ14032 418 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 TMEM132AQ24JP5 1023 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 RAB6CQ53S08 254 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PPM1JQ5JR12 505 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 AMIGO2Q86SJ2 522 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 ATXN7L3BQ96GX2 97 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 LENG8Q96PV6 779 aaPredicted RBP14.1□□□□□ -0.15
SYNE3-201ENST00000334258 RAB6CQ9H0N0 254 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PLAC1Q9HBJ0 212 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 PXMP2Q9NR77 195 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 MKS1Q9NXB0 559 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 GMEB1Q9Y692 573 aa14.1□□□□□ -0.15
SYNE3-201ENST00000334258 MED7O43513 233 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms