RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NOD2Q9HC29 1040 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 KANSL3Q9P2N6 904 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 SLC17A6Q9P2U8 582 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.04
CLCNKA-201ENST00000331433 TSC2P49815 1807 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 HMX2A2RU54 273 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 FAM159BA6NKW6 160 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 A8MUI8 341 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 I3L4J1 428 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 EEF2KO00418 725 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 CHUKO15111 745 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 DCTN3O75935 186 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 IGHA2P01877 340 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 CHRNA1P02708 482 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 USP17L7P0C7H9 530 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 SERPINB4P48594 390 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 SMAD1Q15797 465 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 DSTYKQ6XUX3 929 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 RFX8Q6ZV50 586 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 BZW1Q7L1Q6 419 aaKnown RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 NLRP9Q7RTR0 991 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 TMEM237Q96Q45 408 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 TSSK1BQ9BXA7 367 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 SLC38A7Q9NVC3 462 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 PCDHA11Q9Y5I1 949 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 NUMBLQ9Y6R0 609 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 A0A0G2JND7 137 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 ARL5CA6NH57 179 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 PSMB4P28070 264 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 DAOAP59103 153 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 DPYSQ14117 519 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 CHSY1Q86X52 802 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 STAMBPL1Q96FJ0 436 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 OXNAD1Q96HP4 312 aaPredicted RBP15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 MECRQ9BV79 373 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 HAO1Q9UJM8 370 aa15.32■□□□□ 0.04
CLCNKA-201ENST00000331433 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 KCNK1O00180 336 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 DUSP11O75319 330 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 TROVE2P10155 538 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 FDFT1P37268 417 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 SKIV2L2P42285 1042 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 WASHC5Q12768 1159 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 PAN2Q504Q3 1202 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 ZNF449Q6P9G9 518 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 MTDHQ86UE4 582 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 ZNF567Q8N184 647 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 WDR6Q9NNW5 1121 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 TXLNGQ9NUQ3 528 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 PCMTD2Q9NV79 361 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 SCN10AQ9Y5Y9 1956 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 MANSC4A6NHS7 340 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 C2CD2LO14523 706 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 DCLK1O15075 740 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 KRT38O76015 456 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 CBX6O95503 412 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 TOP3BO95985 862 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 GSTA2P09210 222 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 NCAM1P13591 858 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 ADRA1BP35368 520 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 LHX1P48742 406 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 SARNPP82979 210 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 OLIG2Q13516 323 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 PDK1Q15118 436 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 TAF1BQ53T94 588 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 LGSNQ5TDP6 509 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 CEP57Q86XR8 500 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 IFNL1Q8IU54 200 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 ARMC2Q8NEN0 867 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 SOCS4Q8WXH5 440 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 MTG1Q9BT17 334 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 SENP6Q9GZR1 1112 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 AGO3Q9H9G7 860 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 PLLPQ9Y342 182 aa15.31■□□□□ 0.04
CLCNKA-201ENST00000331433 HTTP42858 3142 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 OPHN1O60890 802 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 STK10O94804 968 aaKnown RBP15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 MGAT1P26572 445 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 GLUD2P49448 558 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 EDEM1Q92611 657 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 TBC1D31Q96DN5 1066 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 PGLYRP2Q96PD5 576 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 DDIT4Q9NX09 232 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 MOCS1Q9NZB8 636 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 NUP205Q92621 2012 aa15.3■□□□□ 0.04
CLCNKA-201ENST00000331433 FBXO21O94952 628 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 T-ENOLP0DO92 83 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 ERCC2P18074 760 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 PAFAH1B3Q15102 231 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 TIGD5Q53EQ6 642 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 LRRC8BQ6P9F7 803 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 HACE1Q8IYU2 909 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 NDUFAF2Q8N183 169 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 TMEM86AQ8N2M4 240 aa15.29■□□□□ 0.04
CLCNKA-201ENST00000331433 TRIM55Q9BYV6 548 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms