RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ARHGEF2Q92974 986 aaKnown RBP15.41■□□□□ 0.06
TPM3-205ENST00000328159 TOX2Q96NM4 488 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 SMOC2Q9H3U7 446 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 EURLQ9NYK6 297 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 SCML2Q9UQR0 700 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 SNX10Q9Y5X0 201 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 RAD54BQ9Y620 910 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 A0A0A0MRY4 1105 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 A0A1W2PQH9 124 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 NT5C1B-RDH14C9J2C7 533 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 STK10O94804 968 aaKnown RBP15.41■□□□□ 0.06
TPM3-205ENST00000328159 TSHRP16473 764 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 GLUD2P49448 558 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 ARPP19P56211 112 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 AP1B1Q10567 949 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 TDRPQ86YL5 185 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 PALM2Q8IXS6 379 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 ATAD1Q8NBU5 361 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 STKLD1Q8NE28 680 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 MDM1Q8TC05 714 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 SPATA13Q96N96 652 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 FERMT1Q9BQL6 677 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 OSBPL2Q9H1P3 480 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 FBXO44Q9H4M3 255 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 PRDM12Q9H4Q4 367 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 ARHGEF38Q9NXL2 777 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 OR12D3Q9UGF7 316 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 NR2E3Q9Y5X4 410 aa15.41■□□□□ 0.06
TPM3-205ENST00000328159 CEP350Q5VT06 3117 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 SRRM3A6NNA2 597 aaPredicted RBP15.4■□□□□ 0.06
TPM3-205ENST00000328159 H7C4K7 107 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 APRTP07741 180 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 CPB1P15086 417 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 TPSB2P20231 275 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 GCAP28676 217 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 SSTR1P30872 391 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 PBX3P40426 434 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 MTM1Q13496 603 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 TPSAB1Q15661 275 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 BRMS1LQ5PSV4 323 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 RTP2Q5QGT7 225 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 ANKRD20A2Q5SQ80 823 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 ANKRD20A1Q5TYW2 823 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 ANKRD20A3Q5VUR7 823 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 CYP4X1Q8N118 509 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 CCNYQ8ND76 341 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 MCUQ8NE86 351 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 CASP10Q92851 521 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 P2RY11Q96G91 374 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 PPCSQ9HAB8 311 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 CHMP2BQ9UQN3 213 aa15.4■□□□□ 0.06
TPM3-205ENST00000328159 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 RNF103O00237 685 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TBC1D4O60343 1298 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 OPHN1O60890 802 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 LRIG2O94898 1065 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 FDFT1P37268 417 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ELK3P41970 407 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 GPR17Q13304 367 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 SEMA5AQ13591 1074 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■□□□ 14.5
TPM3-205ENST00000328159 C3orf62Q6ZUJ4 267 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 MON1AQ86VX9 555 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 IGDCC3Q8IVU1 814 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ARHGAP18Q8N392 663 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TTC9BQ8N6N2 239 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 BCL7CQ8WUZ0 217 aaPredicted RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 CENPTQ96BT3 561 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 EPN3Q9H201 632 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TBK1Q9UHD2 729 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 SFMBT1Q9UHJ3 866 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 RABGEF1Q9UJ41 708 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TEX264Q9Y6I9 313 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 BRCA2P51587 3418 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 MTMR11A4FU01 709 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 NCAM2O15394 837 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 MSI1O43347 362 aaKnown RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 AVILO75366 819 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 CHN1P15882 459 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ATP2A2P16615 1042 aaKnown RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 EPHB2P29323 1055 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 USP46P62068 366 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 PPP2R5DQ14738 602 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TMED2Q15363 201 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 C1orf53Q5VUE5 145 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 RSPO2Q6UXX9 243 aaPredicted RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 DENND5BQ6ZUT9 1274 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 ANKS3Q6ZW76 656 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 TADA2BQ86TJ2 420 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 CAND1Q86VP6 1230 aaKnown RBP15.39■□□□□ 0.05
TPM3-205ENST00000328159 NPWQ8N729 165 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 SPPL2BQ8TCT7 592 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 FBF1Q8TES7 1133 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 MAML1Q92585 1016 aa15.39■□□□□ 0.05
TPM3-205ENST00000328159 HAPLN3Q96S86 360 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms