RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 COLEC11Q9BWP8 271 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 GPR88Q9GZN0 384 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 LRRC40Q9H9A6 602 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 LATS2Q9NRM7 1088 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 TRMT13Q9NUP7 481 aaKnown RBP12.15□□□□□ -0.46
DDR1-223ENST00000324771 RUVBL2Q9Y230 463 aaKnown RBP12.15□□□□□ -0.46
DDR1-223ENST00000324771 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CHRM3P20309 590 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
DDR1-223ENST00000324771 SGO1Q5FBB7 561 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 OLFML2BQ68BL8 750 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 LCLAT1Q6UWP7 414 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 TRIM33Q9UPN9 1127 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 MYO18AQ92614 2054 aaKnown RBP12.15□□□□□ -0.46
DDR1-223ENST00000324771 H0Y626 953 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SUPT7LO94864 414 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 KCNA10Q16322 511 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 LRRC38Q5VT99 294 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 UNC93AQ86WB7 457 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 CCDC185Q8N715 623 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SPDL1Q96EA4 605 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 B3GALT6Q96L58 329 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 TRIM62Q9BVG3 475 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SDCBP2Q9H190 292 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 SLC24A2Q9UI40 661 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 ADGRA2Q96PE1 1338 aa12.15□□□□□ -0.46
DDR1-223ENST00000324771 OR1E1P30953 314 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 C16orf59Q7L2K0 433 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 ZNF75CPQ92670 426 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 PIWIL1Q96J94 861 aaKnown RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 GBP5Q96PP8 586 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SIX4Q9UIU6 781 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 FBXO21O94952 628 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 TNFRSF8P28908 595 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SERPINB3P29508 390 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 AXLP30530 894 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 HADHAP40939 763 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 TBX4P57082 545 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 NFE2Q16621 373 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 SLC45A4Q5BKX6 768 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 ZDHHC24Q6UX98 284 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 FAM35AQ86V20 835 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 TTC30AQ86WT1 665 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 PLD5Q8N7P1 536 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 RFWD2Q8NHY2 731 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 GPR63Q9BZJ6 419 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 VCXQ9H320 206 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 PACSIN3Q9UKS6 424 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 TCRBV9S1A1TA0A576 114 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SOAT2O75908 522 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SNAI1O95863 264 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 MBL2P11226 248 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 NFKB1P19838 968 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SERPINB5P36952 375 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 FNBP1LQ5T0N5 605 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 RAP1GAP2Q684P5 730 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 NAIF1Q69YI7 327 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 ZNF280DQ6N043 979 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 CYP4X1Q8N118 509 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 CARNMT1Q8N4J0 409 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 RNF148Q8N7C7 305 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDR1-223ENST00000324771 EMID1Q96A84 441 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 ULK4Q96C45 1275 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 HSFY1Q96LI6 401 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 FGD4Q96M96 766 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 KLHL5Q96PQ7 755 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 TMEM120AQ9BXJ8 343 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 SLC17A7Q9P2U7 560 aa12.14□□□□□ -0.47
DDR1-223ENST00000324771 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
DDR1-223ENST00000324771 CCDC22O60826 627 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 DNAJC6O75061 913 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 ITGB6P18564 788 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 GPD2P43304 727 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 CRHR2Q13324 411 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 FSCBQ5H9T9 825 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 ARRDC4Q8NCT1 418 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 CPT1BQ92523 772 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 TUBB6Q9BUF5 446 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 CRYL1Q9Y2S2 319 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 C2orf71A6NGG8 1288 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
DDR1-223ENST00000324771 MAP3K7O43318 606 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 SPATA31D3P0C874 917 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 PTPN7P35236 360 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 MATKP42679 507 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
DDR1-223ENST00000324771 MARC1Q5VT66 337 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 SCARA3Q6AZY7 606 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 SPATA31D4Q6ZUB0 917 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 CMC1Q7Z7K0 106 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
DDR1-223ENST00000324771 PRCCQ92733 491 aaPredicted RBP12.13□□□□□ -0.47
DDR1-223ENST00000324771 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms