RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 DNAJB7Q7Z6W7 309 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ITIH5Q86UX2 942 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CCDC13Q8IYE1 715 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 KREMEN2Q8NCW0 462 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ARMC2Q8NEN0 867 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 RSRC1Q96IZ7 334 aaKnown RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SERPINB11Q96P15 392 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CDK5RAP1Q96SZ6 601 aaKnown RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SH3GL3Q99963 347 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 LRRC19Q9H756 370 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ANLNQ9NQW6 1124 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.37e-6■□□□□ 10.1
DDX39A-202ENST00000324340 RCOR3Q9P2K3 495 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 UXTQ9UBK9 157 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 MSRAQ9UJ68 235 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 MAGED2Q9UNF1 606 aaPredicted RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 TLR6Q9Y2C9 796 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 LPXNO60711 386 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 PHF2O75151 1096 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CHRNA3P32297 505 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 KRT81Q14533 505 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 PPP2R5DQ14738 602 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ARL13BQ3SXY8 428 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 ADAT2Q7Z6V5 191 aaKnown RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 NLRP14Q86W24 1093 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 IQCKQ8N0W5 287 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SLC39A13Q96H72 371 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 RNF157Q96PX1 679 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 HEMGNQ9BXL5 484 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 CALN1Q9BXU9 219 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 LMAN2LQ9H0V9 348 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 DHX35Q9H5Z1 703 aaKnown RBP13.2□□□□□ -0.3
DDX39A-202ENST00000324340 WDCPQ9H6R7 721 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 GPATCH2LQ9NWQ4 482 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 PCYOX1Q9UHG3 505 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
DDX39A-202ENST00000324340 OBSL1O75147 1896 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 C5orf60A6NFR6 353 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 KCNU1A8MYU2 1149 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 CLASP2O75122 1294 aaKnown RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 IGLV3-27P01718 113 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 C8AP07357 584 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 GSTA1P08263 222 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SPATA31D3P0C874 917 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SLC2A3P11169 496 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 CCR1P32246 355 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 MDH1P40925 334 aaKnown RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 HCAR3P49019 387 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 ZNF135P52742 658 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 TFDP2Q14188 446 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 LLGL1Q15334 1064 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 TAF12Q16514 161 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 CCNG2Q16589 344 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 ANKRD20A8PQ5CZ79 823 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 EFHC2Q5JST6 749 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 DRICH1Q6PGQ1 229 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SPATA31D4Q6ZUB0 917 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 TMEM150AQ86TG1 271 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 KLHL7Q8IXQ5 586 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 HDAC7Q8WUI4 952 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 SLCO2A1Q92959 643 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 ZNF512Q96ME7 567 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 HAPLN3Q96S86 360 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 CCT8L2Q96SF2 557 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 KCTD15Q96SI1 283 aaPredicted RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 KRT12Q99456 494 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 LRRC3Q9BY71 257 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 DCLK3Q9C098 648 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 DDX47Q9H0S4 455 aaKnown RBP13.19□□□□□ -0.3
DDX39A-202ENST00000324340 OSBPL2Q9H1P3 480 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 NKX2-4Q9H2Z4 354 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 IL21Q9HBE4 155 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 NUDT5Q9UKK9 219 aa13.19□□□□□ -0.3
DDX39A-202ENST00000324340 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 MGRN1O60291 552 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TLR5O60602 858 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CST8O60676 142 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 LRG1P02750 347 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 F11P03951 625 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 HOXA9P31269 272 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 CLNS1AP54105 237 aaKnown RBP13.18□□□□□ -0.3
DDX39A-202ENST00000324340 RING1Q06587 406 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 TTMPQ5BVD1 217 aa13.18□□□□□ -0.3
DDX39A-202ENST00000324340 PRPF38BQ5VTL8 546 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms