RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 DEUP1Q05D60 604 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 PPP6R3Q5H9R7 873 aaPredicted RBP19.66■□□□□ 0.74
RTN4-201ENST00000317610 PDPK2PQ6A1A2 396 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 PMF1Q6P1K2 205 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 KCNT2Q6UVM3 1135 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 TMEM110Q86TL2 294 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 C10orf107Q8IVU9 208 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 CDKL2Q92772 493 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 ZNF668Q96K58 619 aaPredicted RBP19.66■□□□□ 0.74
RTN4-201ENST00000317610 NT5C1AQ9BXI3 368 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 NFKBIZQ9BYH8 718 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 HESX1Q9UBX0 185 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 POMPQ9Y244 141 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 SSX2IPQ9Y2D8 614 aa19.66■□□□□ 0.74
RTN4-201ENST00000317610 PEX1O43933 1283 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 IQCF3P0C7M6 154 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 FDFT1P37268 417 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 EPHB1P54762 984 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 LY6KQ17RY6 165 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 LPCAT4Q643R3 524 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 LRRC8BQ6P9F7 803 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 GDPD5Q8WTR4 605 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 SLC17A6Q9P2U8 582 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 PDE5AO76074 875 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 SETSIPP0DME0 302 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 ABCE1P61221 599 aaKnown RBP19.65■□□□□ 0.74
RTN4-201ENST00000317610 TNFAIP2Q03169 654 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 PRKG1Q13976 671 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 MAP3K21Q5TCX8 1036 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 TFB1MQ8WVM0 346 aaKnown RBP19.65■□□□□ 0.74
RTN4-201ENST00000317610 C11orf84Q9BUA3 381 aaPredicted RBP19.65■□□□□ 0.74
RTN4-201ENST00000317610 IFT122Q9HBG6 1241 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 EIF2B3Q9NR50 452 aaKnown RBP19.65■□□□□ 0.74
RTN4-201ENST00000317610 PRMT7Q9NVM4 692 aaPredicted RBP19.65■□□□□ 0.74
RTN4-201ENST00000317610 COPG2Q9UBF2 871 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 COMMD3-BMI1R4GMX3 469 aa19.65■□□□□ 0.74
RTN4-201ENST00000317610 SORBS2O94875 1100 aaKnown RBP19.64■□□□□ 0.74
RTN4-201ENST00000317610 ITGA2BP08514 1039 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 DPEP1P16444 411 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 DESP17661 470 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 VCLP18206 1134 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 RPS12P25398 132 aaKnown RBP19.64■□□□□ 0.74
RTN4-201ENST00000317610 PEX2P28328 305 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 PTPN9P43378 593 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 AQP4P55087 323 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 FAM187BQ17R55 369 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 SLC5A9Q2M3M2 681 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 CFAP157Q5JU67 520 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 HEATR6Q6AI08 1181 aaKnown RBP19.64■□□□□ 0.74
RTN4-201ENST00000317610 SDCCAG8Q86SQ7 713 aaPredicted RBP19.64■□□□□ 0.74
RTN4-201ENST00000317610 BTBD9Q96Q07 612 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 VCX3AQ9NNX9 186 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 MTMR10Q9NXD2 777 aa19.64■□□□□ 0.74
RTN4-201ENST00000317610 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 A0A0A0MRY4 1105 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 AP1G1O43747 822 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 PGAM1P18669 254 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 SLC10A6Q3KNW5 377 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 RSPH3Q86UC2 560 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 TTC30AQ86WT1 665 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 FBXW8Q8N3Y1 598 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 C12orf29Q8N999 325 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 ARNTL2Q8WYA1 636 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 CENPIQ92674 756 aaPredicted RBP19.64■□□□□ 0.73
RTN4-201ENST00000317610 SPATA13Q96N96 652 aa19.64■□□□□ 0.73
RTN4-201ENST00000317610 TRIP11Q15643 1979 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 H3BNX3 289 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PAPSS1O43252 624 aaPredicted RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 GABBR2O75899 941 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 DGKIO75912 1065 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 VAV1P15498 845 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 ACAT1P24752 427 aaKnown RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 HSDL1Q3SXM5 330 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 KBTBD6Q86V97 674 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 ZDHHC17Q8IUH5 632 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 HACE1Q8IYU2 909 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 DEFB107AQ8IZN7 70 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PIP4K2CQ8TBX8 421 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 TRAPPC12Q8WVT3 735 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 DTLQ9NZJ0 730 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 TMEM216Q9P0N5 145 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PSAT1Q9Y617 370 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 SCN4AP35499 1836 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PTPRFP10586 1907 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 HACD1B0YJ81 288 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 ARIH2O95376 493 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 RALBP11234 206 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 TFE3P19532 575 aaPredicted RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 GRIA2P42262 883 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 MTTPP55157 894 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 TMEM132DQ14C87 1099 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 AMHR2Q16671 573 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 LRRC36Q1X8D7 754 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 PPP1R26Q5T8A7 1209 aaPredicted RBP19.63■□□□□ 0.73
RTN4-201ENST00000317610 NCBP2-AS2Q69YL0 99 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 LBX2Q6XYB7 198 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 SAMD7Q7Z3H4 446 aa19.63■□□□□ 0.73
RTN4-201ENST00000317610 NME8Q8N427 588 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms