RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 VAT1Q99536 393 aa14.37□□□□□ -0.11
VAMP2-201ENST00000316509 PAAF1Q9BRP4 392 aa14.37□□□□□ -0.11
VAMP2-201ENST00000316509 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.37□□□□□ -0.11
VAMP2-201ENST00000316509 ARL2BPQ9Y2Y0 163 aa14.37□□□□□ -0.11
VAMP2-201ENST00000316509 STARD13Q9Y3M8 1113 aa14.37□□□□□ -0.11
VAMP2-201ENST00000316509 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
VAMP2-201ENST00000316509 CREB3O43889 395 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 MFSD11O43934 449 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 CKBP12277 381 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 CNTFP26441 200 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 BRCC3P46736 316 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 SERPINB9P50453 376 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 TPI1P60174 286 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 PITX1P78337 314 aaPredicted RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 SLC18A2Q05940 514 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ACTN3Q08043 901 aaPredicted RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 NAB1Q13506 487 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 BRMS1LQ5PSV4 323 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 DCP1BQ8IZD4 617 aaKnown RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 BANPQ8N9N5 519 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 GDAP1Q8TB36 358 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 P2RY11Q96G91 374 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 MAGEB5Q9BZ81 275 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 VPS11Q9H270 941 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 TRMT13Q9NUP7 481 aaKnown RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 TRHDEQ9UKU6 1024 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 A0A1W2PPM1 405 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 SDR42E2A6NKP2 422 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ERI2A8K979 691 aaKnown RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 AP3B1O00203 1094 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 SNRPAP09012 282 aaKnown RBP14.36□□□□□ -0.11
VAMP2-201ENST00000316509 VAV1P15498 845 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ELNP15502 786 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ERCC2P18074 760 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 COG7P83436 770 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 DNAJC3Q13217 504 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 KBTBD12Q3ZCT8 623 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 GPRIN1Q7Z2K8 1008 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 SPATA21Q7Z572 469 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 PITPNM3Q9BZ71 974 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 CACNG4Q9UBN1 327 aa14.36□□□□□ -0.11
VAMP2-201ENST00000316509 PSMD3O43242 534 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 SPAG7O75391 227 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 KRT38O76015 456 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 OAZ2O95190 189 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 C1QAP02745 245 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 ALADP13716 330 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 BDNFP23560 247 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 RPA3P35244 121 aaPredicted RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 TSC2P49815 1807 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 CACNA2D1P54289 1103 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 YWHAHQ04917 246 aaPredicted RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 DSC1Q08554 894 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 PPIDQ08752 370 aaKnown RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 AP1B1Q10567 949 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 STEAP4Q687X5 459 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 ZNF534Q76KX8 674 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 SPATA2LQ8IUW3 424 aaPredicted RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 LRRC8CQ8TDW0 803 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 HAPLN3Q96S86 360 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 OSBPL7Q9BZF2 842 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 PRDM12Q9H4Q4 367 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 ELAC1Q9H777 363 aaKnown RBP14.35□□□□□ -0.11
VAMP2-201ENST00000316509 FGFR1OP2Q9NVK5 253 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 HAUS2Q9NVX0 235 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 PRKAG3Q9UGI9 489 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 INPP5FQ9Y2H2 1132 aa14.35□□□□□ -0.11
VAMP2-201ENST00000316509 SYNJ2BP-COX16A0A087WUM0 186 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 FOXO6A8MYZ6 492 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 RNF103O00237 685 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 AVILO75366 819 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 ALDH1A2O94788 518 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 IGLV3-25P01717 112 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 PRMT2P55345 433 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 EIF4EBP2Q13542 120 aaPredicted RBP14.34□□□□□ -0.11
VAMP2-201ENST00000316509 NOMO2Q5JPE7 1267 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 FAXCQ5TGI0 409 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 TRPM8Q7Z2W7 1104 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 C4orf33Q8N1A6 199 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 CCNYQ8ND76 341 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 TTC17Q96AE7 1141 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 HDAC11Q96DB2 347 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 CFAP36Q96G28 342 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 FUBP3Q96I24 572 aaKnown RBP eCLIP14.34□□□□□ -0.11
VAMP2-201ENST00000316509 LGMNQ99538 433 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 MKS1Q9NXB0 559 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 COX16Q9P0S2 106 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 FAM159BA6NKW6 160 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 TRIM66O15016 1216 aa14.34□□□□□ -0.11
VAMP2-201ENST00000316509 DNAJB2P25686 324 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms