RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 ADAMTS4O75173 837 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 CRYBB1P53674 252 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 AQP5P55064 265 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 ARHGAP8P85298 464 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 DCAF4L1Q3SXM0 396 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 KCNT1Q5JUK3 1230 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 GSTCDQ8NEC7 633 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 OR6Y1Q8NGX8 325 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 RILPQ96NA2 401 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 OLFM3Q96PB7 478 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 IL1RAPL1Q9NZN1 696 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 DNAJB4Q9UDY4 337 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 SNX9Q9Y5X1 595 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 TRIP11Q15643 1979 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 TRIM49D1C9J1S8 452 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 HOXC8P31273 242 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 AFF1P51825 1210 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 RBP5P82980 135 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 FAM182AQ5T1J6 154 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 CES4AQ5XG92 561 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 TWF2Q6IBS0 349 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 CTAGE3PQ8IX95 158 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 FAM71DQ8N9W8 422 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 PYDC1Q8WXC3 89 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 HEXIM2Q96MH2 286 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 ZFP42Q96MM3 310 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 GPAMQ9HCL2 828 aa17.73■□□□□ 0.43
SCAMP4-201ENST00000316097 SPATA31D3P0C874 917 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 NDST1P52848 882 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 CDC42EP1Q00587 391 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 UBAP2LQ14157 1087 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 CHI3L2Q15782 390 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 TMCO4Q5TGY1 634 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SPATA31D4Q6ZUB0 917 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 ACAD11Q709F0 780 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 UBA3Q8TBC4 463 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 E2F7Q96AV8 911 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SPC25Q9HBM1 224 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 COMMD3-BMI1R4GMX3 469 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 CHRNA1P02708 482 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 STIP1P31948 543 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SOX4Q06945 474 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SMG8Q8ND04 991 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 C7orf26Q96N11 449 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 MRPL45Q9BRJ2 306 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 CCDC106Q9BWC9 280 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SLC13A1Q9BZW2 595 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 ITGA11Q9UKX5 1188 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 IPPQ9Y573 584 aa17.72■□□□□ 0.43
SCAMP4-201ENST00000316097 SMIM28A0A1B0GU29 152 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 ARHGAP42A6NI28 874 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 C3orf70A6NLC5 250 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 CYB561D2O14569 222 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 CILPO75339 1184 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 FKBP6O75344 327 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 CALB1P05937 261 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 LSAMPQ13449 338 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 PIGHQ14442 188 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 ATG16L1Q676U5 607 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 ALKAL1Q6UXT8 129 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 PPM1NQ8N819 430 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 MKI67P46013 3256 aaKnown RBP17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 SFT2D3Q587I9 215 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 ZNF618Q5T7W0 954 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 LPCAT4Q643R3 524 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 PPP1R2P3Q6NXS1 205 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 PDSS2Q86YH6 399 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 CFAP36Q96G28 342 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 S100A14Q9HCY8 104 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 ST3GAL5Q9UNP4 418 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 NME7Q9Y5B8 376 aa17.71■□□□□ 0.43
SCAMP4-201ENST00000316097 TCRBV5S1A1TA0A578 114 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 AVILO75366 819 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 MYCP01106 439 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TSHRP16473 764 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 GRIA2P42262 883 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 PDE1BQ01064 536 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 MED21Q13503 144 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 HNRNPDQ14103 355 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 ZBTB6Q15916 424 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 KYAT1Q16773 422 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 DHDDSQ86SQ9 333 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 FAM172AQ8WUF8 416 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 NAT14Q8WUY8 206 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 LPPQ93052 612 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 ITFG2Q969R8 447 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TRMT13Q9NUP7 481 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TBC1D30Q9Y2I9 924 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 A0A088AWK7 358 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 CD48P09326 243 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 THPOP40225 353 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 MRPS6P82932 125 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 SLC25A3Q00325 362 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 PTPN11Q06124 597 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 ASPHQ12797 758 aa17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 TTC39BQ5VTQ0 682 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-201ENST00000316097 KYAT3Q6YP21 454 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms