RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ALLCQ8N6M5 410 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 TMEM121Q9BTD3 319 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 ETNK2Q9NVF9 386 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 YBX2Q9Y2T7 364 aaKnown RBP23.3■■□□□ 1.32
IRF3-201ENST00000309877 SNX24Q9Y343 169 aa23.3■■□□□ 1.32
IRF3-201ENST00000309877 ZNF638Q14966 1978 aaKnown RBP23.3■■□□□ 1.32
IRF3-201ENST00000309877 SGK1O00141 431 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 KRT14P02533 472 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 HMBSP08397 361 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 TRIP13Q15645 432 aaPredicted RBP23.29■■□□□ 1.32
IRF3-201ENST00000309877 NCBP2-AS2Q69YL0 99 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 ZC3H18Q86VM9 953 aaKnown RBP23.29■■□□□ 1.32
IRF3-201ENST00000309877 ATP6V0D2Q8N8Y2 350 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 RSAD2Q8WXG1 361 aa23.29■■□□□ 1.32
IRF3-201ENST00000309877 LRIG2O94898 1065 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 SRGAP2BP0DMP2 458 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 IRS1P35568 1242 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 CLCN4P51793 760 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 PABPC1LQ4VXU2 614 aaKnown RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 PDE12Q6L8Q7 609 aaKnown RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 BZW1Q7L1Q6 419 aaKnown RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 CCDC89Q8N998 374 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 EIF1ADQ8N9N8 165 aaKnown RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 HBS1LQ9Y450 684 aaKnown RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 H3BNC9 293 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 ERCC2P18074 760 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 EPHB2P29323 1055 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 GGCXP38435 758 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 PBX2P40425 430 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 TUBP50607 506 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 GBE1Q04446 702 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 RING1Q06587 406 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 CAMK1Q14012 370 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 KLHDC10Q6PID8 442 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 PDZD4Q76G19 769 aaPredicted RBP23.28■■□□□ 1.32
IRF3-201ENST00000309877 CCHCR1Q8TD31 782 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 MSRAQ9UJ68 235 aa23.28■■□□□ 1.32
IRF3-201ENST00000309877 DCLK1O15075 740 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 COCHO43405 550 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 SEC31AO94979 1220 aaKnown RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 MAP3K6O95382 1288 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 HTR7P34969 479 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 ADCY8P40145 1251 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 RPL21P46778 160 aaKnown RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 RBM10P98175 930 aaKnown RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 PPM1LQ5SGD2 360 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 RWDD4Q6NW29 188 aaKnown RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.27■■□□□ 1.324e-11■■■■■ 96.3
IRF3-201ENST00000309877 BTN2A3PQ96KV6 586 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 C1orf74Q96LT6 269 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 GDF15Q99988 308 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 C10orf88Q9H8K7 445 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 ZNF334Q9HCZ1 680 aaPredicted RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 XPO7Q9UIA9 1087 aaKnown RBP23.27■■□□□ 1.32
IRF3-201ENST00000309877 NEU2Q9Y3R4 380 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 MFHAS1Q9Y4C4 1052 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 HS3ST4Q9Y661 456 aa23.27■■□□□ 1.32
IRF3-201ENST00000309877 IFNB1P01574 187 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 IGLV3-27P01718 113 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 F11P03951 625 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 VPS41P49754 854 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 MTA1Q13330 715 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 PAFAH1B3Q15102 231 aaKnown RBP23.26■■□□□ 1.31
IRF3-201ENST00000309877 BEND6Q5SZJ8 279 aaPredicted RBP23.26■■□□□ 1.31
IRF3-201ENST00000309877 UNC45BQ8IWX7 931 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 PBX4Q9BYU1 374 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 CERS4Q9HA82 394 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 DTLQ9NZJ0 730 aa23.26■■□□□ 1.31
IRF3-201ENST00000309877 STIP1P31948 543 aaKnown RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 MLLT6P55198 1093 aaPredicted RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 COG7P83436 770 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 SLC10A2Q12908 348 aaPredicted RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 CALCOCO2Q13137 446 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 XRCC4Q13426 336 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 NUGGCQ68CJ6 796 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 RTL10Q7L3V2 364 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 CDKL3Q8IVW4 592 aaPredicted RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 AENQ8WTP8 325 aaKnown RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 TBC1D31Q96DN5 1066 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 NKX2-4Q9H2Z4 354 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 C2orf78A6NCI8 922 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 MFSD11O43934 449 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 C1RP00736 705 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 TNNT3P45378 269 aaPredicted RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 NRG1Q02297 640 aaPredicted RBP23.25■■□□□ 1.31
IRF3-201ENST00000309877 RAB30Q15771 203 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 EMBQ6PCB8 327 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 B4GALNT4Q76KP1 1039 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 TNS4Q8IZW8 715 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 FAM71DQ8N9W8 422 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 SNF8Q96H20 258 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 IL21Q9HBE4 155 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 PCDH9Q9HC56 1237 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 MAN1C1Q9NR34 630 aa23.25■■□□□ 1.31
IRF3-201ENST00000309877 CFAP69A5D8W1 941 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 E9PAM4 449 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 CCL16O15467 120 aa23.24■■□□□ 1.31
IRF3-201ENST00000309877 CLASP2O75122 1294 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms