RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 PCSK1NQ9UHG2 260 aa13.36□□□□□ -0.27
APTX-201ENST00000309615 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
APTX-201ENST00000309615 HS3ST4Q9Y661 456 aa13.36□□□□□ -0.27
APTX-201ENST00000309615 TSPAN3O60637 253 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 SOX9P48436 509 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 SGSHP51688 502 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 PFKPQ01813 784 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 UBALD2Q8IYN6 164 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 CPXM2Q8N436 756 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 CPA6Q8N4T0 437 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 DNASE1L2Q92874 299 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 PEBP4Q96S96 227 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 PRMT1Q99873 361 aaKnown RBP13.35□□□□□ -0.27
APTX-201ENST00000309615 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
APTX-201ENST00000309615 BTNL10A8MVZ5 291 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 GFRA2O00451 464 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 BUB1O43683 1085 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 ADH1CP00326 375 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 CCDC175P0C221 793 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 TACR2P21452 398 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 PCK1P35558 622 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 ARHGAP25P42331 645 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 HADHBP55084 474 aaKnown RBP13.34□□□□□ -0.27
APTX-201ENST00000309615 KIF5AQ12840 1032 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 AUHQ13825 339 aaKnown RBP13.34□□□□□ -0.27
APTX-201ENST00000309615 ANO4Q32M45 955 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 ARL13BQ3SXY8 428 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
APTX-201ENST00000309615 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 CHSY1Q86X52 802 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 NTAN1Q96AB6 310 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 CHFRQ96EP1 664 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 PRICKLE1Q96MT3 831 aaPredicted RBP13.34□□□□□ -0.27
APTX-201ENST00000309615 HAPLN3Q96S86 360 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 CA14Q9ULX7 337 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 USP18Q9UMW8 372 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 TICRRQ7Z2Z1 1910 aa13.34□□□□□ -0.27
APTX-201ENST00000309615 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 NEDD8-MDP1E9PL57 170 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 PRPSAP2O60256 369 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 BUB1BO60566 1050 aaPredicted RBP13.33□□□□□ -0.27
APTX-201ENST00000309615 ADH5P11766 374 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 IL1R2P27930 398 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 GJA4P35212 333 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.27
APTX-201ENST00000309615 ZXDAP98168 799 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 MTA1Q13330 715 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 GAB4Q2WGN9 574 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 SLC44A4Q53GD3 710 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 FYB2Q5VWT5 728 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 NAIF1Q69YI7 327 aaPredicted RBP13.33□□□□□ -0.27
APTX-201ENST00000309615 TXNRD3NBQ6F5E7 133 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 C14orf80Q86SX3 495 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 LGI2Q8N0V4 545 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 DDI1Q8WTU0 396 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.27
APTX-201ENST00000309615 BBS2Q9BXC9 721 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 GOLPH3Q9H4A6 298 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 GPATCH2LQ9NWQ4 482 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 VANGL2Q9ULK5 521 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 FZD10Q9ULW2 581 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 PPP2R2CQ9Y2T4 447 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 HYOU1Q9Y4L1 999 aa13.33□□□□□ -0.27
APTX-201ENST00000309615 COL4A2P08572 1712 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 COL4A3Q01955 1670 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 F5H5T6 163 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 DCXO43602 365 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 TYRP14679 529 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 MAN1A1P33908 653 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
APTX-201ENST00000309615 RPS24P62847 133 aaKnown RBP13.33□□□□□ -0.28
APTX-201ENST00000309615 SLC25A11Q02978 314 aaKnown RBP13.33□□□□□ -0.28
APTX-201ENST00000309615 SCAPQ12770 1279 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 NR1H3Q13133 447 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 KCNT1Q5JUK3 1230 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 FBXL22Q6P050 247 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 CFAP52Q8N1V2 620 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 PYROXD2Q8N2H3 581 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 NAT16Q8N8M0 369 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 TPCN2Q8NHX9 752 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 TMA16Q96EY4 203 aaKnown RBP13.33□□□□□ -0.28
APTX-201ENST00000309615 C1orf74Q96LT6 269 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 NCAPGQ9BPX3 1015 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 ZWILCHQ9H900 591 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 MARK1Q9P0L2 795 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 WNT16Q9UBV4 365 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 OR12D3Q9UGF7 316 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 LCMT1Q9UIC8 334 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 FBXL21Q9UKT6 434 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 PIAS3Q9Y6X2 628 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 TRIOO75962 3097 aa13.33□□□□□ -0.28
APTX-201ENST00000309615 KRBA1A5PL33 1030 aa13.32□□□□□ -0.28
APTX-201ENST00000309615 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
APTX-201ENST00000309615 FAM72CH0Y354 149 aa13.32□□□□□ -0.28
APTX-201ENST00000309615 HOXC11O43248 304 aaPredicted RBP13.32□□□□□ -0.28
APTX-201ENST00000309615 PENKP01210 267 aaPredicted RBP13.32□□□□□ -0.28
APTX-201ENST00000309615 CTHP32929 405 aa13.32□□□□□ -0.28
APTX-201ENST00000309615 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms