RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 RGL4Q8IZJ4 473 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 MLKLQ8NB16 471 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 WFIKKN2Q8TEU8 576 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 ZNF606Q8WXB4 792 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 SERPINB11Q96P15 392 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 STIM2Q9P246 746 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 GGA2Q9UJY4 613 aa20.3■□□□□ 0.84
LIME1-201ENST00000309546 E5RJQ4 531 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 TIMM44O43615 452 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 MOCS2O96007 188 aaPredicted RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 FYNP06241 537 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 CD6P30203 668 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 RPL34P49207 117 aaKnown RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 EXOC3L4Q17RC7 722 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 DUOXA1Q1HG43 343 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 FAM133BQ5BKY9 247 aaKnown RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 PIK3R6Q5UE93 754 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 SLC23A3Q6PIS1 610 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 TAC4Q86UU9 113 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 TMPRSS6Q8IU80 811 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 AHI1Q8N157 1196 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 ZNF366Q8N895 744 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 WFDC5Q8TCV5 224 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 SIPA1Q96FS4 1042 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 FCRL2Q96LA5 508 aaPredicted RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 FAM81BQ96LP2 452 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 GTPBP2Q9BX10 602 aaKnown RBP20.29■□□□□ 0.84
LIME1-201ENST00000309546 CLSTN2Q9H4D0 955 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 APEX2Q9UBZ4 518 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 CYTH4Q9UIA0 394 aa20.29■□□□□ 0.84
LIME1-201ENST00000309546 TYW5A2RUC4 315 aaKnown RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 BECN2A8MW95 431 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 MEI4A8MW99 385 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 ACADMP11310 421 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 HOXD12P35452 270 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 ATXN3P54252 364 aaPredicted RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 MEA1Q16626 185 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 SH3PXD2AQ5TCZ1 1133 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 NADSYN1Q6IA69 706 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 IRF2BP1Q8IU81 584 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 MFN1Q8IWA4 741 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 HJURPQ8NCD3 748 aaPredicted RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 CEP76Q8TAP6 659 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 TOE1Q96GM8 510 aaKnown RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 PRICKLE1Q96MT3 831 aaPredicted RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 DDX50Q9BQ39 737 aaKnown RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 TRIM62Q9BVG3 475 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 SLC4A5Q9BY07 1137 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 USP36Q9P275 1121 aaKnown RBP20.28■□□□□ 0.84
LIME1-201ENST00000309546 SLC6A14Q9UN76 642 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 PLA2G4CQ9UP65 541 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 TLR6Q9Y2C9 796 aa20.28■□□□□ 0.84
LIME1-201ENST00000309546 IRAK2O43187 625 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 PAPSS1O43252 624 aaPredicted RBP20.27■□□□□ 0.84
LIME1-201ENST00000309546 CD70P32970 193 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 COPAP53621 1224 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 GFPT1Q06210 699 aaPredicted RBP20.27■□□□□ 0.84
LIME1-201ENST00000309546 PDCLQ13371 301 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 HSP90AA4PQ58FG1 418 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 SYPL2Q5VXT5 272 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 MBLAC2Q68D91 279 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 ADIPOR2Q86V24 386 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 PASD1Q8IV76 773 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.27■□□□□ 0.84
LIME1-201ENST00000309546 STK32AQ8WU08 396 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 GPR174Q9BXC1 333 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 NUCKS1Q9H1E3 243 aaKnown RBP20.27■□□□□ 0.84
LIME1-201ENST00000309546 TJP2Q9UDY2 1190 aa20.27■□□□□ 0.84
LIME1-201ENST00000309546 PCDH15Q96QU1 1955 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 ASCC3Q8N3C0 2202 aaKnown RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 GTPBP10A4D1E9 387 aaKnown RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 KCNJ18B7U540 433 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 GIPC1O14908 333 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 APOEP02649 317 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 SERPINF2P08697 491 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 POLR2EP19388 210 aaKnown RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 PON1P27169 355 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 TPMTP51580 245 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 NNTQ13423 1086 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 MAN2A1Q16706 1144 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 DPCR1Q3MIW9 517 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 MPP7Q5T2T1 576 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 SYCP2LQ5T4T6 812 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 RABEPKQ7Z6M1 372 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 METTL3Q86U44 580 aaKnown RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 FAM114A1Q8IWE2 563 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 CARNMT1Q8N4J0 409 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 SHC3Q92529 594 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 FOXJ1Q92949 421 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 AZIN2Q96A70 460 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 MYEOVQ96EZ4 313 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 ZNF419Q96HQ0 510 aaPredicted RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 THAP9Q9H5L6 903 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 POPDC2Q9HBU9 364 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 ITM2CQ9NQX7 267 aa20.26■□□□□ 0.83
LIME1-201ENST00000309546 WSB2Q9NYS7 404 aaPredicted RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 AJAP1Q9UKB5 411 aaPredicted RBP20.26■□□□□ 0.83
LIME1-201ENST00000309546 ATP5BP06576 529 aaKnown RBP20.25■□□□□ 0.83
LIME1-201ENST00000309546 PRKCSHP14314 528 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms