RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 HHLA1C9JL84 531 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 MED7O43513 233 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 MICAL2O94851 1124 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CALCAP01258 141 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 RHOP08100 348 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CSH1P0DML2 217 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CSH2P0DML3 217 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 ATP6V1B1P15313 513 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CYP11B1P15538 503 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 ANXA13P27216 316 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 GPD2P43304 727 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 RPL34P49207 117 aaKnown RBP8.59□□□□□ -1.03
CHD6-201ENST00000309279 BCAT1P54687 386 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 MAP3K7CLP57077 242 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 ZBTB17Q13105 803 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 GALEQ14376 348 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 VEPH1Q14D04 833 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CLUL1Q15846 466 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 RAB41Q5JT25 222 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 SDHAF4Q5VUM1 108 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 ARHGEF18Q6ZSZ5 1173 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 RAPH1Q70E73 1250 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 IRF2BP2Q7Z5L9 587 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 GRASPQ7Z6J2 395 aaPredicted RBP8.59□□□□□ -1.03
CHD6-201ENST00000309279 TMC8Q8IU68 726 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 NUP93Q8N1F7 819 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 KIAA1524Q8TCG1 905 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 GPR152Q8TDT2 470 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 DDX1Q92499 740 aaKnown RBP8.59□□□□□ -1.03
CHD6-201ENST00000309279 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 TRIM5Q9C035 493 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 PIDD1Q9HB75 910 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 IL21Q9HBE4 155 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 HCFC1R1Q9NWW0 138 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 EHD2Q9NZN4 543 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 AIPL1Q9NZN9 384 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 HESX1Q9UBX0 185 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CDH22Q9UJ99 828 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 CAPN11Q9UMQ6 739 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.59□□□□□ -1.031e-6■■□□□ 14.1
CHD6-201ENST00000309279 ANAPC1Q9H1A4 1944 aa8.59□□□□□ -1.03
CHD6-201ENST00000309279 NCOR1O75376 2440 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 OBSL1O75147 1896 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 XPO1O14980 1071 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 FGF19O95750 216 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 GYPCP04921 128 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SLC8A3P57103 927 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CTAG1AP78358 180 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 MRPS5P82675 430 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 BST2Q10589 180 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 GOLGA7BQ2TAP0 167 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 PABPC1LQ4VXU2 614 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 PRSS36Q5K4E3 855 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CYP4A22Q5TCH4 519 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TRIM68Q6AZZ1 485 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 PTCRAQ6ISU1 281 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 CRTC1Q6UUV9 634 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 GAREM2Q75VX8 874 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TMEM150AQ86TG1 271 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ZBTB46Q86UZ6 589 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ZNF677Q86XU0 584 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 KCTD13Q8WZ19 329 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SYN2Q92777 582 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 CFAP36Q96G28 342 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 BARD1Q99728 777 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 CORO1BQ9BR76 489 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 LHX5Q9H2C1 402 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 POMKQ9H5K3 350 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ASAH2Q9NR71 780 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 RRN3Q9NYV6 651 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 UXTQ9UBK9 157 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 ADAMTS1Q9UHI8 967 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 NOCTQ9UK39 431 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 GPR52Q9Y2T5 361 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TMEM98Q9Y2Y6 226 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 USP3Q9Y6I4 520 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 V9GYY5 206 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 NCANO14594 1321 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CLUHO75153 1309 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 LRRC53A6NM62 1247 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SOBPA7XYQ1 873 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TULP2O00295 520 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 ZNF197O14709 1029 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 THAP12O43422 761 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 TMEM127O75204 238 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 MOSPD3O75425 235 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 RTN3O95197 1032 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 F11P03951 625 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 KRT1P04264 644 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CFHP08603 1231 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 BMP1P13497 986 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 FERP16591 822 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CDH5P33151 784 aaPredicted RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 KRT9P35527 623 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 CCR2P41597 374 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SKIV2L2P42285 1042 aaKnown RBP8.58□□□□□ -1.04
CHD6-201ENST00000309279 ZNF75DP51815 510 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 KIF11P52732 1056 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 SLC5A3P53794 718 aa8.58□□□□□ -1.04
CHD6-201ENST00000309279 USP46P62068 366 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms